- Discovery of two new satellite RNAs with hammerhead structures in French and Spanish Carrots

Babalola, B.M., Schönegger, D., Faure, C., Marais, A., Fraile, A., Garcia-Arenal, F., Candresse, T. 2022. Identification of two novel putative satellite RNAs with hammerhead structures in the virome of French and Spanish carrot samples. Archives of Virology. DOI: 10.1007/s00705-022-05538-z


- Presence of Apium virus Y in Spanish wild carrots

Babalola, B.M., Faure, C., Marais, A., Fraile, A., Garcia-Arenal, F., Candresse, T. 2022. First report of Apium virus Y in wild carrot (Daucus carota ssp. carota) in Spain. New Disease Reports 45, e12097. DOI: 10.1002/ndr2.12097


- An automatic method to quantify trichomes in Arabidopsis thaliana

Garcia, A., Talavera-Mateo, L., Santamaria, M.E. 2022. An automatic method to quantify trichomes in Arabidopsis thaliana. Plant Science 323, 111391. DOI: 10.1016/j.plantsci.2022.111391


- Rapid and simple colorimetric method developed for screening of nitrogenase variants

Payá-Tormo, L., Coroian, D., Martín-Muñoz, S., Badalyan, A., Green, R.T., Veldhuizen, M., Jiang, X., López-Torrejón, G., Balk, J., Seefeldt, L.C., Burén, S., Rubio, L.M. 2022. A colorimetric method to measure in vitro nitrogenase functionality for engineering nitrogen fixation. Scientific Reports 12, 10367. DOI: 10.1038/s41598-022-14453-x


- Farewell to fertilizers? A step further

Jiang, X., Coroian, D., Barahona, E., Echavarri-Erasun, C., Castellanos-Rueda, R., Eseverri, Á., Aznar-Moreno, J.A., Burén, S., Rubio, L.M. 2022. Functional Nitrogenase Cofactor Maturase NifB in Mitochondria and Chloroplasts of Nicotiana benthamiana. mBio 0, e00268-22. DOI: 10.1128/mbio.00268-22


- Phytopathogenic bacteria perceive plant-derived compounds to ensure plant entry and the onset of the infection

Santamaría-Hernando, S., López-Maroto, Á., Galvez-Roldán, C., Munar-Palmer, M., Monteagudo-Cascales, E., Rodríguez-Herva, J.-J., Krell, T., López-Solanilla, E. n.d. Pseudomonas syringae pv. tomato infection of tomato plants is mediated by GABA and l-Pro chemoperception. Molecular Plant Pathology n/a. DOI: 10.1111/mpp.13238


- Hydroxynitrile lyase defends Arabidopsis against Tetranychus urticae

Arnaiz, A., Santamaria, M.E., Rosa-Diaz, I., Garcia, I., Dixit, S., Vallejos, S., Gotor, C., Martinez, M., Grbic, V., Diaz, I. 2022. Hydroxynitrile lyase defends Arabidopsis against Tetranychus urticae. Plant Physiology kiac170. DOI: 10.1093/plphys/kiac170


- Three new clades of putative viral RNA-dependent RNA polymerases with rare or unique catalytic triads discovered in libraries of ORFans from powdery mildews and the yeast of oenological interest Starmerella bacillaris

Forgia, M., Chiapello, M., Daghino, S., Pacifico, D., Crucitti, D., Oliva, D., Ayllon, M., Turina, M., Turina, M. 2022. Three new clades of putative viral RNA-dependent RNA polymerases with rare or unique catalytic triads discovered in libraries of ORFans from powdery mildews and the yeast of oenological interest Starmerella bacillaris. Virus Evolution 8, veac038. DOI: 10.1093/ve/veac038


- Gene Overlapping as a Modulator of Begomovirus Evolution

Martín-Hernández, I., Pagán, I. 2022. Gene Overlapping as a Modulator of Begomovirus Evolution. Microorganisms 10, 366. DOI: 10.3390/microorganisms10020366


- Deciphering the essential role of HOP co-chaperones in auxin signaling

Muñoz, A., Mangano, S., Toribio, R., Fernández-Calvino, L., del Pozo, J.C., Castellano, M.M. n.d. The co-chaperone HOP participates in TIR1 stabilization and in auxin response in plants. Plant, Cell & Environment n/a. DOI: 10.1111/pce.14366


- New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency

Uribe, F., Henríquez-Valencia, C., Arenas-M, A., Medina, J., Vidal, E.A., Canales, J. 2022. Evolutionary and Gene Expression Analyses Reveal New Insights into the Role of LSU Gene-Family in Plant Responses to Sulfate-Deficiency. Plants 11, 1526. DOI: 10.3390/plants11121526


- Molecular Data of a Novel Penoulivirus Associated with the Plant-Pathogenic Fungus Erysiphe necator

Galán-Cubero, R., Córdoba, L., Rodríguez-Romero, J., Chiapello, M., Turina, M., Ayllón, M.A. 2022. Molecular Data of a Novel Penoulivirus Associated with the Plant-Pathogenic Fungus Erysiphe necator. Phytopathology® PHYTO-12-21-0536-A. DOI: 10.1094/PHYTO-12-21-0536-A


- Real-life evaluation of molecular multiplex IgE test methods in the diagnosis of pollen associated food allergy

Diem, L., Neuherz, B., Rohrhofer, J., Koidl, L., Asero, R., Brockow, K., Diaz Perales, A., Faber, M., Gebhardt, J., Torres, M., Jensen-Jarolim, E., Zehetmayer, S., Untersmayr, E. n.d. Real-life evaluation of molecular multiplex IgE test methods in the diagnosis of pollen associated food allergy. Allergy n/a. DOI: 10.1111/all.15329


- Development of a tool to study fungus-plant interactions

Córdoba, L., Ruiz-Padilla, A., Rodríguez-Romero, J., Ayllón, M.A. 2022. Construction and Characterization of a Botrytis Virus F Infectious Clone. Journal of Fungi 8, 459. DOI: 10.3390/jof8050459


- A new protein belonging to the Lipid Transfer Proteins family has been identified in durum wheat

Missaoui, K., Gonzalez-Klein, Z., Jemli, S., Garrido-Arandia, M., Diaz-Perales, A., Tome-Amat, J., Brini, F. 2022. Identification and molecular characterization of a novel non-specific lipid transfer protein (TdLTP2) from durum wheat. PLOS ONE 17, e0266971. DOI: 10.1371/journal.pone.0266971


- Secretory protein beta-lactoglobulin in cattle stable dust may contribute to the allergy-protective farm effect

Pali-Schöll, I., Bianchini, R., Afify, S.M., Hofstetter, G., Winkler, S., Ahlers, S., Altemeier, T., Mayerhofer, H., Hufnagl, K., Korath, A.D.J., Pranger, C., Widhalm, R., Hann, S., Wittek, T., Kasper-Giebl, A., Pacios, L.F., Roth-Walter, F., Vercelli, D., von Mutius, E., Jensen-Jarolim, E. 2022. Secretory protein beta-lactoglobulin in cattle stable dust may contribute to the allergy-protective farm effect. Clinical and Translational Allergy 12, e12125. DOI: 10.1002/clt2.12125


- Translation Regulation and Protein Folding

Castellano, M.M., Ferrando, A., Geisler, M., Mock, H.-P., Muñoz, A. 2022. Editorial: Translation Regulation and Protein Folding. Frontiers in Plant Science 13. DOI: 10.3389/fpls.2022.858794


- Achieving FAIRness via Comma Separated Values and “smart” templates

Kaliyaperumal, R., Wilkinson, M.D., Moreno, P.A., Benis, N., Cornet, R., dos Santos Vieira, B., Dumontier, M., Bernabé, C.H., Jacobsen, A., Le Cornec, C.M.A., Godoy, M.P., Queralt-Rosinach, N., Schultze Kool, L.J., Swertz, M.A., van Damme, P., van der Velde, K.J., Lalout, N., Zhang, S., Roos, M. 2022. Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data. Journal of Biomedical Semantics 13, 9. DOI: 10.1186/s13326-022-00264-6


- Keeping our skin healthy: the first step to prevent food allergy

Pazos-Castro, D., Gonzalez-Klein, Z., Montalvo, A.Y., Hernandez-Ramirez, G., Romero-Sahagun, A., Esteban, V., Garrido-Arandia, M., Tome-Amat, J., Diaz-Perales, A. 2022. NLRP3 priming due to skin damage precedes LTP allergic sensitization in a mouse model. Scientific Reports 12, 3329. DOI: 10.1038/s41598-022-07421-y


- How does Flowering locus T2 work in poplar? Shedding light on its novel functions

Gómez-Soto, D., Allona, I., Perales, M. 2022. FLOWERING LOCUS T2 Promotes Shoot Apex Development and Restricts Internode Elongation via the 13-Hydroxylation Gibberellin Biosynthesis Pathway in Poplar. Frontiers in Plant Science 12. DOI: 10.3389/fpls.2021.814195


- Micronutrient homeostasis in plants for more sustainable agriculture and healthier human nutrition

Assunção, A.G.L., Cakmak, I., Clemens, S., González-Guerrero, M., Nawrocki, A., Thomine, S. 2022. Micronutrient homeostasis in plants for more sustainable agriculture and healthier human nutrition. Journal of Experimental Botany erac014. DOI: 10.1093/jxb/erac014


- Plant-Pest Interactions: a research topic of interest for pest control

Suzuki, T., Broufas, G., Smagghe, G., Ortego, F., Broekgaarden, C., Diaz, I. 2021. Editorial: Plant-Pest Interactions Volume III: Coleoptera and Lepidoptera. Frontiers in Plant Science 12, 1674. DOI: 10.3389/fpls.2021.730290


Ortego, F., Broekgaarden, C., Suzuki, T., Broufas, G., Smagghe, G., Diaz, I. 2021. Editorial: Plant-Pest Interactions Volume II: Hemiptera. Frontiers in Plant Science 12, 1978. DOI: 10.3389/fpls.2021.748999


Broufas, G., Ortego, F., Suzuki, T., Smagghe, G., Broekgaarden, C., Diaz, I. 2022. Editorial: Plant-Pest Interactions Volume I: Acari and Thrips. Frontiers in Plant Science 12. DOI: 10.3389/fpls.2021.773439


- Epigenetic modifiers regulate flowering time in Brassica crops

Poza-Viejo, L., Payá-Milans, M., Martín-Uriz, P.S., Castro-Labrador, L., Lara-Astiaso, D., Wilkinson, M.D., Piñeiro, M., Jarillo, J.A., Crevillén, P. 2022. Conserved and distinct roles of H3K27me3 demethylases regulating flowering time in Brassica rapa. Plant, Cell & Environment n/a. DOI: 10.1111/pce.14258


- Turnip mosaic virus, a virus for all seasons

Nellist, C.F., Ohshima, K., Ponz, F., Walsh, J.A. 2022. Turnip Mosaic Virus, a Virus for All Seasons. Annals of Applied Biology n/a. DOI: 10.1111/aab.12755


- Transcriptomic landscape of hervibore oviposition in Arabidopsis: a systematic review

Ojeda-Martinez, D., Diaz, I., Santamaria, M.E. 2022. Transcriptomic Landscape of Herbivore Oviposition in Arabidopsis: A Systematic Review. Frontiers in Plant Science. DOI: 10.3389/fpls.2021.772492


- Towards laboratory automation

Tellechea-Luzardo, J., Otero-Muras, I., Goñi-Moreno, A., Carbonell, P. 2022. Fast biofoundries: coping with the challenges of biomanufacturing. Trends in Biotechnology. DOI: 10.1016/j.tibtech.2021.12.006


- Identified the key role of the phytohormone ABA in the response to Nitrogen availability in the root endodermis

Contreras-López, O., Vidal, E.A., Riveras, E., Alvarez, J.M., Moyano, T.C., Sparks, E.E., Medina, J., Pasquino, A., Benfey, P.N., Coruzzi, G.M., Gutiérrez, R.A. 2022. Spatiotemporal analysis identifies ABF2 and ABF3 as key hubs of endodermal response to nitrate. Proceedings of the National Academy of Sciences 119. DOI: 10.1073/pnas.2107879119


- Plant Science’s Contribution to fighting viral pandemics: COVID-19 as a case study

Avesani, L., Ponz, F. 2022. Editorial: Plant Science’s Contribution to Fighting Viral Pandemics: COVID-19 as a Case Study. Frontiers in Plant Science 12. DOI: 10.3389/fpls.2021.824440


- The relevance of plant LTPs: from agriculture to health

Missaoui, K., Gonzalez-Klein, Z., Pazos-Castro, D., Hernandez-Ramirez, G., Garrido-Arandia, M., Brini, F., Diaz-Perales, A., Tome-Amat, J. 2022. Plant non-specific lipid transfer proteins: An overview. Plant Physiology and Biochemistry 171, 115–127. DOI: 10.1016/j.plaphy.2021.12.026



- Iron-only nitrogenase: the simplest and most attractive target for mobilizing nitrogen fixation into crops

Pérez-González, A., Jimenez-Vicente, E., Gies-Elterlein, J., Salinero-Lanzarote, A., Yang, Z.-Y., Einsle, O., Seefeldt, L.C., Dean, D.R. 2021. Specificity of NifEN and VnfEN for the Assembly of Nitrogenase Active Site Cofactors in Azotobacter vinelandii. mBio 12, e0156821. DOI: 10.1128/mBio.01568-21


- May the dark be with roots: Effects of root illumination in vitro experiments

Cabrera, J., Conesa, C.M., del Pozo, J.C. n.d. May the dark be with roots: A perspective on how root illumination may bias in vitro research on plant–environment interactions. New Phytologist n/a. DOI: 10.1111/nph.17936


- In mineral nutrition in the symbiotic associations between fungi and plants, the beneficiary is not always the plant: an example is the nutrition of potassium

Conchillo, L.B., Haro, R., Benito, B. 2021. K+ Nutrition Exchange in the Serendipita-Arabidopsis Symbiosis: Study of the Fungal K+ Transporters Involved. Frontiers in Ecology and Evolution 9, 876. DOI: 10.3389/fevo.2021.789371


- Towards the biogeography of prokaryotic genes

Coelho, L.P., Alves, R., del Río, Á.R., Myers, P.N., Cantalapiedra, C.P., Giner-Lamia, J., Schmidt, T.S., Mende, D.R., Orakov, A., Letunic, I., Hildebrand, F., Van Rossum, T., Forslund, S.K., Khedkar, S., Maistrenko, O.M., Pan, S., Jia, L., Ferretti, P., Sunagawa, S., Zhao, X.-M., Nielsen, H.B., Huerta-Cepas, J., Bork, P. 2021. Towards the biogeography of prokaryotic genes. Nature 1–5. DOI: 10.1038/s41586-021-04233-4


- A quasi-universal method to isolate RNA?

Oñate-Sánchez, L., Verdonk, J.C. 2021. Citrate-Citric Acid RNA Isolation (CiAR) for Fast, Low-Cost, and Reliable RNA Extraction from Multiple Plant Species and Tissues. Current Protocols 1, e298. DOI: 10.1002/cpz1.298


- Assessment of genomic prediction reliability and optimization of experimental designs in multi-environment trials

Rio, S., Akdemir, D., Carvalho, T., Isidro y Sánchez, J. 2021. Assessment of genomic prediction reliability and optimization of experimental designs in multi-environment trials. Theoretical and Applied Genetics. DOI: 10.1007/s00122-021-03972-2


- Flowering genes modulate plant tolerance to virus infection

Shukla, A., Pagán, I., Crevillén, P., Alonso-Blanco, C., García-Arenal, F. 2021. A role of flowering genes in the tolerance of Arabidopsis thaliana to cucumber mosaic virus. Molecular Plant Pathology. DOI: 10.1111/mpp.13151


- eggNOG-mapper v2: efficient functional annotation of genomes and metagenomes

Cantalapiedra, C.P., Hernández-Plaza, A., Letunic, I., Bork, P., Huerta-Cepas, J. 2021. eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale. Molecular Biology and Evolution. DOI: 10.1093/molbev/msab293


- Rhizobia that nodulate lupins do so efficiently if they have a secretory nanosyringe

Tighilt, L., Boulila, F., De Sousa, B.F.S., Giraud, E., Ruiz-Argüeso, T., Palacios, J.M., Imperial, J., Rey, L. 2021. The Bradyrhizobium Sp. LmicA16 Type VI Secretion System Is Required for Efficient Nodulation of Lupinus Spp.. Microbial Ecology 1–12. DOI: 10.1007/s00248-021-01892-8


- Molecular and structural characterization of expansins modulated by fungal endophytes in the Antarctic Colobanthus quitensis (Kunth) Bartl. Exposed to drought stress

Morales-Quintana, L., Barrera, A., Hereme, R., Jara, K., Rivera-Mora, C., Valenzuela-Riffo, F., Gundel, P.E., Pollmann, S., Molina-Montenegro, M.A., Ramos, P. 2021. Molecular and structural characterization of expansins modulated by fungal endophytes in the Antarctic Colobanthus quitensis (Kunth) Bartl. Exposed to drought stress. Plant Physiology and Biochemistry 168, 465–476. DOI: 10.1016/j.plaphy.2021.10.036


- Mechano-biochemical principles of anisotropic root growth

Marconi, M., Gallemi, M., Benkova, E., Wabnik, K. 2021. A coupled mechano-biochemical model for cell polarity guided anisotropic root growth. eLife 10, e72132. DOI: 10.7554/eLife.72132


- Lo que las esponjas marinas pueden decirnos sobre la evolución del cerebro

Musser, J.M., Schippers, K.J., Nickel, M., Mizzon, G., Kohn, A.B., Pape, C., Ronchi, P., Papadopoulos, N., Tarashansky, A.J., Hammel, J.U., Wolf, F., Liang, C., Hernández-Plaza, A., Cantalapiedra, C.P., Achim, K., Schieber, N.L., Pan, L., Ruperti, F., Francis, W.R., Vargas, S., Kling, S., Renkert, M., Polikarpov, M., Bourenkov, G., Feuda, R., Gaspar, I., Burkhardt, P., Wang, B., Bork, P., Beck, M., Schneider, T.R., Kreshuk, A., Wörheide, G., Huerta-Cepas, J., Schwab, Y., Moroz, L.L., Arendt, D. 2021. Profiling cellular diversity in sponges informs animal cell type and nervous system evolution. Science 374, 717–723. DOI: 10.1126/science.abj2949


- Alternaria alternata as an inducer of allergic diseases

Hernandez-Ramirez, G., Barber, D., Tome-Amat, J., Garrido-Arandia, M., Diaz-Perales, A. 2021. Alternaria as an Inducer of Allergic Sensitization. Journal of Fungi 7, 838. DOI: 10.3390/jof7100838


- Lifestyle and niche adaptation play an important role in the selection of the chemosensory receptor profile of bacteria

Sanchis-López, C., Cerna-Vargas, J.P., Santamaría-Hernando, S., Ramos, C., Krell, T., Rodríguez-Palenzuela, P., López-Solanilla, E., Huerta-Cepas, J., Rodríguez-Herva, J.J. 2021. Prevalence and Specificity of Chemoreceptor Profiles in Plant-Associated Bacteria. mSystems e00951-21. DOI: 10.1128/mSystems.00951-21


- Soil composition and plant genotype determine benzoxazinoid-mediated plant–soil feedbacks in cereals

Cadot, S., Gfeller, V., Hu, L., Singh, N., Sánchez-Vallet, A., Glauser, G., Croll, D., Erb, M., van der Heijden, M.G.A., Schlaeppi, K. 2021. Soil composition and plant genotype determine benzoxazinoid-mediated plant–soil feedbacks in cereals. Plant, Cell & Environment. DOI: 10.1111/pce.14184


- Shaping the organ: How plants make forms

Marconi, M., Wabnik, K. 2021. Shaping the Organ: A Biologist Guide to Quantitative Models of Plant Morphogenesis. Frontiers in Plant Science 12, 2171. DOI: 10.3389/fpls.2021.746183


- Different strains of the same virus differentially alter typical plant developmental traits, including secondary cell wall deposition

López-González, S., Gómez-Mena, C., Sánchez, F., Schuetz, M., Lacey Samuels, A., Ponz, F. 2021. The Effects of Turnip Mosaic Virus Infections on the Deposition of Secondary Cell Walls and Developmental Defects in Arabidopsis Plants Are Virus-Strain Specific. Frontiers in Plant Science 12, 2221. DOI: 10.3389/fpls.2021.741050


- Training Set Optimization for Sparse Phenotyping in Genomic Selection: A Conceptual Overview

Isidro y Sánchez, J., Akdemir, D. 2021. Training Set Optimization for Sparse Phenotyping in Genomic Selection: A Conceptual Overview. Frontiers in Plant Science 12, 1889. DOI: 10.3389/fpls.2021.715910


- Better in tandem

Pérez-Alonso, M.-M., Sánchez-Parra, B., Ortiz-García, P., Santamaría, M.E., Díaz, I., Pollmann, S. 2021. Jasmonic Acid-Dependent MYC Transcription Factors Bind to a Tandem G-Box Motif in the YUCCA8 and YUCCA9 Promoters to Regulate Biotic Stress Responses. International Journal of Molecular Sciences 22, 9768. DOI: 10.3390/ijms22189768


- vacio

Santamaria, M.E., Garcia, A., Arnaiz, A., Rosa-Diaz, I., Romero-Hernandez, G., Diaz, I., Martinez, M. 2021. Comparative transcriptomics reveals hidden issues in the plant response to arthropod herbivores. Journal of Integrative Plant Biology 63, 312–326. DOI: 10.1111/jipb.13026


- Structuring of plant communities across agricultural landscape mosaics: the importance of connectivity and the scale of effect

McLeish, M., Peláez, A., Pagán, I., Gavilán, R., Fraile, A., García-Arenal, F. 2021. Structuring of plant communities across agricultural landscape mosaics: the importance of connectivity and the scale of effect. BMC Ecology and Evolution 21, 173. DOI: 10.1186/s12862-021-01903-9


- How Do Pathogens Evolve Novel Virulence Activities?

Sacristán, S., Goss, E.M., Eves-van den Akker, S. 2021. How Do Pathogens Evolve Novel Virulence Activities?. Molecular Plant-Microbe Interactions® MPMI-09-20-0258-IA. DOI: 10.1094/MPMI-09-20-0258-IA


- Arabidopsis uses Zinc-toxicity as a defence mechanism against the necrotrophic fungus Plectosphaerella cucumerina

Escudero, V., Ferreira Sánchez, D., Abreu, I., Sopeña-Torres, S., Makarovsky-Saavedra, N., Bernal, M., Krämer, U., Grolimund, D., González-Guerrero, M., Jordá, L. 2022. Arabidopsis thaliana Zn 2+-efflux ATPases HMA2 and HMA4 are required for resistance to the necrotrophic fungus Plectosphaerella cucumerina BMM. Journal of Experimental Botany. DOI: 10.1093/jxb/erab400


- The co-chaperone HOP3 plays an essential role in jasmonate hormone signaling and in plant defense

Muñoz, A., Santamaria, M.E., Fernández-Bautista, N., Mangano, S., Toribio, R., Martínez, M., Berrocal-Lobo, M., Díaz, I., Castellano, M.M. 2021. The co-chaperone HOP3 participates in jasmonic acid signaling by regulating CORONATINE INSENSITIVE 1 activity. Plant Physiology. DOI: 10.1093/plphys/kiab334


- Green technology to fight pollution: How poplar trees manage to degrade persistent carcinogenic polluta

Contreras, Á., Merino, I., Álvarez, E., Bolonio, D., Ortiz, J.-E., Oñate-Sánchez, L., Gómez, L. 2021. A poplar short-chain dehydrogenase reductase plays a potential key role in biphenyl detoxification. Proceedings of the National Academy of Sciences USA 118, e2103378118. DOI: 10.1073/pnas.2103378118


- A small metallochaperone balances transfer and protection of the labile iron-molybdenum cofactor of nitrogenase

Phillips, A.H., Hernandez, J.A., Payá-Tormo, L., Burén, S., Cuevas-Zuviría, B., Pacios, L.F., Pelton, J.G., Wemmer, D.E., Rubio, L.M. 2021. Environment and coordination of FeMo–co in the nitrogenase metallochaperone NafY. RSC Chemical Biology. DOI: 10.1039/D1CB00086A


- High genetic diversity of endosymbiotic bacteria from blue lupin (Lupinus angustifolius)

Msaddak, A., Rey, L., Imperial, J., Palacios, J.M., Mars, M., Pueyo, J.J. 2021. Phylogenetic Analyses of Rhizobia Isolated from Nodules of Lupinus angustifolius in Northern Tunisia Reveal Devosia sp. as a New Microsymbiont of Lupin Species. Agronomy 11, 1510. DOI: 10.3390/agronomy11081510


- Spider mite egg extract modifies Arabidopsis response to future infestations

Ojeda-Martinez, D., Martinez, M., Diaz, I., Estrella Santamaria, M. 2021. Spider mite egg extract modifies Arabidopsis response to future infestations. Scientific Reports 11, 17692. DOI: 10.1038/s41598-021-97245-z


- Multiplex plant hormone analytics

Pérez-Alonso, M.-M., Ortiz-García, P., Moya-Cuevas, J., Pollmann, S. 2021. Mass Spectrometric Monitoring of Plant Hormone Cross Talk During Biotic Stress Responses in Potato (Solanum tuberosumSolanum tuberosumL.), in: Dobnik, D., Gruden, K., Ramšak, Ž., Coll, A. (Eds.), Solanum Tuberosum: Methods and Protocols, Methods in Molecular Biology. Springer US, New York, NY, pp. 143–154. DOI: 10.1007/978-1-0716-1609-3_7


- Amide signaling compounds contribnute to plant stress adaptation

Moya-Cuevas, J., Pérez-Alonso, M.-M., Ortiz-García, P., Pollmann, S. 2021. Beyond the Usual Suspects: Physiological Roles of the Arabidopsis Amidase Signature (AS) Superfamily Members in Plant Growth Processes and Stress Responses. Biomolecules 11, 1207. DOI: 10.3390/biom11081207


- Automated design and implementation of a genetic circuit

Tas, H., Grozinger, L., Goñi-Moreno, A., de Lorenzo, V. 2021. Automated Design and Implementation of a NOR Gate in Pseudomonas Putida. Synthetic Biology. DOI: 10.1093/synbio/ysab024


- How translation is adapted to plant characteristics?

Castellano, M.M., Merchante, C. 2021. Peculiarities of the regulation of translation initiation in plants. Current Opinion in Plant Biology 63, 102073. DOI: 10.1016/j.pbi.2021.102073


- Genomic prediction and training set optimization in a structured Mediterranean oat population

Rio, S., Gallego-Sánchez, L., Montilla-Bascón, G., Canales, F.J., Isidro y Sánchez, J., Prats, E. 2021. Genomic prediction and training set optimization in a structured Mediterranean oat population. Theoretical and Applied Genetics. DOI: 10.1007/s00122-021-03916-w


- A conserved C-terminal peptide of sorghum phosphoenolpyruvate carboxylase promotes its proteolysis, which is prevented by Glc-6P or the phosphorylation state of the enzyme

Gandullo, J., Álvarez, R., Feria, A.-B., Monreal, J.-A., Díaz, I., Vidal, J., Echevarría, C. 2021. A conserved C-terminal peptide of sorghum phosphoenolpyruvate carboxylase promotes its proteolysis, which is prevented by Glc-6P or the phosphorylation state of the enzyme. Planta 254, 43. DOI: 10.1007/s00425-021-03692-3


- Development of a new system for detection of antibodies against SARS-CoV-2 by researchers from the CBGP

Murillo, A.M.M., Tomé-Amat, J., Ramírez, Y., Garrido-Arandia, M., Valle, L.G., Hernández-Ramírez, G., Tramarin, L., Herreros, P., Santamaría, B., Díaz-Perales, A., Holgado, M. 2021. Developing an optical interferometric detection method based biosensor for the detection of detecting specific SARS-CoV-2 immunoglobulins in serum and saliva, and their corresponding ELISA correlation. Sensors and Actuators B: Chemical 130394. DOI: 10.1016/j.snb.2021.130394


- Industrially produced plant-made SARS-CoV-2 N protein shows its suitability for serological diagnosis of COVID-19

Williams, L., Jurado, S., Llorente, F., Romualdo, A., González, S., Saconne, A., Bronchalo, I., Martínez-Cortes, M., Pérez-Gómez, B., Ponz, F., Jiménez-Clavero, M.Á., Lunello, P. 2021. The C-Terminal Half of SARS-CoV-2 Nucleocapsid Protein, Industrially Produced in Plants, Is Valid as Antigen in COVID-19 Serological Tests. Frontiers in Plant Science. DOI: 10.3389/fpls.2021.699665


- Disentangling transcriptional responses in plant defense against arthropod herbivores

Garcia, A., Santamaria, M.E., Diaz, I., Martinez, M. 2021. Disentangling transcriptional responses in plant defense against arthropod herbivores. Scientific Reports 11, 12996. DOI: 10.1038/s41598-021-92468-6


- Analysis of the responses to nitrogen limitation in tomato: New strategies for sustainable agriculture

Renau-Morata, B., Molina, R.-V., Minguet, E.G., Cebolla-Cornejo, J., Carrillo, L., Martí, R., García-Carpintero, V., Jiménez-Benavente, E., Yang, L., Cañizares, J., Canales, J., Medina, J., Nebauer, S.G. 2021. Integrative Transcriptomic and Metabolomic Analysis at Organ Scale Reveals Gene Modules Involved in the Responses to Suboptimal Nitrogen Supply in Tomato. Agronomy 11, 1320. DOI: 10.3390/agronomy11071320


- Tolerance to aluminum: from model plant to crop

Silva-Navas, J., Salvador, N., del Pozo, J.C., Benito, C., Gallego, F.J. 2021. The rye transcription factor ScSTOP1 regulates the tolerance to aluminum by activating the ALMT1 transporter. Plant Science 310, 110951. DOI: 10.1016/j.plantsci.2021.110951


- Cell populations synchronized through plant hormones

Pérez-García, S., García-Navarrete, M., Ruiz-Sanchis, D., Prieto-Navarro, C., Avdovic, M., Pucciariello, O., Wabnik, K. 2021. Synchronization of gene expression across eukaryotic communities through chemical rhythms. Nature Communications 12, 4017. DOI: 10.1038/s41467-021-24325-z


- A chromatin switch attenuates abiotic stress responses during the floral transition

Barrero-Gil, J., Mouriz, A., Piqueras, R., Salinas, J., Jarillo, J.A., Piñeiro, M. 2021. A MRG-operated chromatin switch at SOC1 attenuates abiotic stress responses during the floral transition. Plant Physiology. DOI: 10.1093/plphys/kiab275


- Non-specific lipid-transfer proteins: Allergen structure and function, cross-reactivity, sensitization, and epidemiology

Skypala, I.J., Asero, R., Barber, D., Cecchi, L., Diaz-Perales, A., Hoffmann-Sommergruber, K., Pastorello, E.A., Swoboda, I., Bartra, J., Ebo, D.G., Faber, M.A., Fernández-Rivas, M., Gomez, F., Konstantinopoulos, A.P., Luengo, O., Ree, R. van, Scala, E., Till, S.J. 2021. Non-specific lipid-transfer proteins: Allergen structure and function, cross-reactivity, sensitization, and epidemiology. Clinical and Translational Allergy 11, e12010. DOI: 10.1002/clt2.12010


- Identification and functional analysis of MADS12, a gene involve in the reactivation of growth after winter in trees

Gómez-Soto, D., Ramos-Sánchez, J.M., Alique, D., Conde, D., Triozzi, P.M., Perales, M., Allona, I. 2021. Overexpression of a SOC1-Related Gene Promotes Bud Break in Ecodormant Poplars. Frontiers in Plant Science 12. DOI: 10.3389/fpls.2021.670497


- The best attack does not always start by a good defense: Higher plant tolerance/resistance may be an evolutionary advantage for viruses

Montes, N., Vijayan, V., Pagán, I. 2021. Host population structure for tolerance determines the evolution of plant-virus interactions. New Phytologist. DOI: https://doi.org/10.1111/nph.17466


- Integration of Single-cell Omics with Gene Regulatory Network Reconstruction maximizes dissection of molecular processes

Serrano-Ron, L., Cabrera, J., Perez-Garcia, P., Moreno-Risueno, M.A. 2021. Unraveling Root Development Through Single-Cell Omics and Reconstruction of Gene Regulatory Networks. Frontiers in Plant Science 12, 671. DOI: 10.3389/fpls.2021.661361


- Single-cell disection of Lateral Root ontogeny

Serrano-Ron, L., Perez-Garcia, P., Sanchez-Corrionero, A., Gude, I., Cabrera, J., Ip, P.-L., Birnbaum, K.D., Moreno-Risueno, M.A. 2021. RECONSTRUCTION OF LATERAL ROOT FORMATION THROUGH SINGLE-CELL RNA-SEQ REVEALS ORDER OF TISSUE INITIATION. Molecular Plant. DOI: 10.1016/j.molp.2021.05.028


- The ligands transported by allergenic Lipid Transfer Proteins (LTPs) mimic human inflammatory mediators

Gonzalez-Klein, Z., Cuevas-Zuviria, B., Wangorsch, A., Hernandez-Ramirez, G., Pazos-Castro, D., Oeo-Santos, C., Romero-Sahagun, A., Pacios, L.F., Tome-Amat, J., Scheurer, S., Diaz-Perales, A., Garrido-Arandia, M. 2021. The key to the allergenicity of lipid transfer protein (LTP) ligands: A structural characterization. Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids 1866, 158928. DOI: 10.1016/j.bbalip.2021.158928


- Electron density in biomacromolecules obtained through Artificial Intelligence with Deep Learning

Cuevas-Zuviría, B., Pacios, L.F. 2021. Machine Learning of Analytical Electron Density in Large Molecules Through Message-Passing. Journal of Chemical Information and Modeling. DOI: 10.1021/acs.jcim.1c00227


- Characterization of the wider collection of mycoviruses infecting the fungus Botrytis cinerea for its use as biocontrol agents

Ruiz-Padilla, A., Rodríguez-Romero, J., Gómez-Cid, I., Pacifico, D., Ayllón, M.A. 2021. Novel Mycoviruses Discovered in the Mycovirome of a Necrotrophic Fungus. mBio 12. DOI: 10.1128/mBio.03705-20


- TrainSel: An R Package for Selection of Training Populations

Akdemir, D., Rio, S., Isidro y Sánchez, J. 2021. TrainSel: An R Package for Selection of Training Populations. Frontiers in Genetics 12. DOI: 10.3389/fgene.2021.655287


- The wall that protects plants from the effects of virus infection

Montes, N., Cobos, A., Gil-Valle, M., Caro, E., Pagán, I. 2021. Arabidopsis thaliana Genes Associated with Cucumber mosaic virus Virulence and Their Link to Virus Seed Transmission. Microorganisms 9, 692. DOI: 10.3390/microorganisms9040692


- Identified a new function of CERES in plant defense against potyviruses

Toribio, R., Muñoz, A.,Sánchez, F., Ponz, F., Castellano, M.M. 2021. High overexpression of CERES, a plant regulator of translation, induces different phenotypical defense responses during TuMV infection. The Plant Journal. DOI: https://doi.org/10.1111/tpj.15290


- FeMo-co biosynthesis secret unveiled

Jenner, L.P., Cherrier, M.V., Amara, P., Rubio, L.M., Nicolet, Y. 2021. An unexpected P-cluster like intermediate en route to the nitrogenase FeMo-co. Chemical Science 12, 5269–5274. DOI: 10.1039/D1SC00289A


- Proteome Analysis Reveals a Significant Host-Specific Response in Rhizobium leguminosarum bv. viciae Endosymbiotic Cells

Durán, D., Albareda, M., García, C., Marina, A.-I., Ruiz-Argüeso, T., Palacios, J.-M. 2021. Proteome Analysis Reveals a Significant Host-Specific Response in Rhizobium leguminosarum bv. viciae Endosymbiotic Cells. Molecular & Cellular Proteomics 20, 100009. DOI: 10.1074/mcp.RA120.002276


- Genotype by Environment Interaction Analysis of Agronomic Spring Barley Traits in Iceland Using AMMI, Factorial Regression Model and Linear Mixed Model

Smári Hilmarsson, H., Rio, S., Isidro y Sánchez, J. 2021. Genotype by Environment Interaction Analysis of Agronomic Spring Barley Traits in Iceland Using AMMI, Factorial Regression Model and Linear Mixed Model. Agronomy 11, 499. DOI: 10.3390/agronomy11030499


- Computational predictions of receptor proteins-glycans interactions triggering plant immunity

Hierro, I. del, Mélida, H., Broyart, C., Santiago, J., Molina, A. 2021. Computational prediction method to decipher receptor–glycoligand interactions in plant immunity. The Plant Journal 105, 1710–1726. DOI: https://doi.org/10.1111/tpj.15133


- A peptide transporter participates in nodule metal homeostasis

Castro-Rodríguez, R., Escudero, V., Reguera, M., Gil-Díez, P., Quintana, J., Prieto, R.I., Kumar, R.K., Brear, E., Grillet, L., Wen, J., Mysore, K.S., Walker, E.L., Smith, P.M.C., Imperial, J., González-Guerrero, M. 2021. Medicago truncatula Yellow Stripe-Like7 encodes a peptide transporter participating in symbiotic nitrogen fixation. Plant, Cell & Environment. DOI: 10.1111/pce.14059


- The bacteria Pseudomonas putida presents a highly precise intracellular organisation

Kim, J., Goñi-Moreno, A., Lorenzo, V. de 2021. Subcellular Architecture of the xyl Gene Expression Flow of the TOL Catabolic Plasmid of Pseudomonas putida mt-2. mBio 12. DOI: 10.1128/mBio.03685-20


- Old genetic resources and new genomic tools for a resilient agriculture

De la Rosa, L., López-Román, M.I., González, J.M., Zambrana, E., Marcos-Prado, T., Ramírez-Parra, E. 2021. Common Vetch, Valuable Germplasm for Resilient Agriculture: Genetic Characterization and Spanish Core Collection Development. Frontiers in Plant Science 12, 282. DOI: 10.3389/fpls.2021.617873


- Mixed infections alter transmission potential in a fungal plant pathogen

Barrett, L.G., Zala, M., Mikaberidze, A., Alassimone, J., Ahmad, M., McDonald, B.A., Sánchez‐Vallet, A. 2021. Mixed infections alter transmission potential in a fungal plant pathogen. Environmental Microbiology. DOI: https://doi.org/10.1111/1462-2920.15417


- The diagnosis and management of allergic reactions in patients sensitized to non-specific Lipid Transfer Proteins

Skypala, I.J., Bartra, J., Ebo, D.G., Faber, M.A., Fernández‐Rivas, M., Gomez, F., Luengo, O., Till, S.J., Asero, R., Barber, D., Cecchi, L., Diaz-Perales, A., Hoffmann‐Sommergruber, K., Pastorello, E.A., Swoboda, I., Konstantinopoulos, A.P., Ree, R. van, Scala, E. 2021. The diagnosis and management of allergic reactions in patients sensitized to non-specific Lipid Transfer Proteins. Allergy. DOI: https://doi.org/10.1111/all.14797


- Excessive accumulation of the auxin precursor IAM hampers embry devepment in Arabidopsis

Sánchez-Parra, B., Pérez-Alonso, M.-M., Ortiz-García, P., Moya-Cuevas, J., Hentrich, M., Pollmann, S. 2021. Accumulation of the Auxin Precursor Indole-3-Acetamide Curtails Growth through the Repression of Ribosome-Biogenesis and Development-Related Transcriptional Networks. International Journal of Molecular Sciences 22, 2040. DOI: 10.3390/ijms22042040


- Development of synthetic biology tools for the expression of recombinant proteins in rice plastids

Eseverri, Á., Baysal, C., Medina, V., Capell, T., Christou, P., Rubio, L.M., Caro, E. 2020. Transit Peptides From Photosynthesis-Related Proteins Mediate Import of a Marker Protein Into Different Plastid Types and Within Different Species. Frontiers in Plant Science 11, 1474. DOI: 10.3389/fpls.2020.560701


- Biosynthesis of cofactor activatable iron-only nitrogenase in Saccharomyces cerevisiae

López‐Torrejón, G., Burén, S., Veldhuizen, M., Rubio, L.M. 2021. Biosynthesis of cofactor-activatable iron-only nitrogenase in Saccharomyces cerevisiae. Microbial Biotechnology. DOI: https://doi.org/10.1111/1751-7915.13758


- Mixed‐linked β‐1,3/1,4‐glucans derived from the cell walls of microorganisms and plants trigger disease resistance responses in plants

Rebaque, D., Hierro, I. del, López, G., Bacete, L., Vilaplana, F., Dallabernardina, P., Pfrengle, F., Jordá, L., Sánchez‐Vallet, A., Pérez, R., Brunner, F., Molina, A., Mélida, H. 2021. Cell wall-derived mixed-linked β-1,3/1,4-glucans trigger immune responses and disease resistance in plants. The Plant Journal. DOI: https://doi.org/10.1111/tpj.15185


- Soybean Yellow Stripe-like 7 is a symbiosome membrane peptide transporter important for nitrogen fixation

Gavrin, A., Loughlin, P.C., Brear, E., Griffith, O.W., Bedon, F., Suter Grotemeyer, M., Escudero, V., Reguera, M., Qu, Y., Mohd-Noor, S.N., Chen, C., Borges Osorio, M., Rentsch, D., González-Guerrero, M., Day, D.A., Smith, P.M.C. 2021. Soybean Yellow Stripe-like 7 is a symbiosome membrane peptide transporter important for nitrogen fixation. Plant Physiology. DOI: 10.1093/plphys/kiab044


- Sweet Immunity: plant cell wall is a dynamic structure determining plant disease resistance to pathogens and fitness

Molina, A., Miedes, E., Bacete, L., Rodríguez, T., Mélida, H., Denancé, N., Sánchez-Vallet, A., Rivière, M.-P., López, G., Freydier, A., Barlet, X., Pattathil, S., Hahn, M., Goffner, D. 2021. Arabidopsis cell wall composition determines disease resistance specificity and fitness. Proceedings of the National Academy of Sciences 118, e2010243118. DOI: 10.1073/pnas.2010243118


- Repression of barley cathepsins, HvPap-19 and HvPap-1, differentially alters grain composition and delays germination

Gomez-Sanchez, A., Santamaria, M.E., Gonzalez-Melendi, P., Muszynska, A., Matthess, C., Martinez, M., Diaz, I. 2021. Repression of barley cathepsins, HvPap-19 and HvPap-1, differentially alters grain composition and delays germination. Journal of Experimental Botany. DOI: 10.1093/jxb/erab007


- Are Physicochemical Properties Shaping the Allergenic Potency of Animal Allergens?

Costa, J., Villa, C., Verhoeckx, K., Cirkovic-Velickovic, T., Schrama, D., Roncada, P., Rodrigues, P.M., Piras, C., Martín-Pedraza, L., Monaci, L., Molina, E., Mazzucchelli, G., Mafra, I., Lupi, R., Lozano-Ojalvo, D., Larré, C., Klueber, J., Gelencser, E., Bueno-Diaz, C., Diaz-Perales, A., Benedé, S., Bavaro, S.L., Kuehn, A., Hoffmann-Sommergruber, K., Holzhauser, T. 2021. Are Physicochemical Properties Shaping the Allergenic Potency of Animal Allergens?. Clinical Reviews in Allergy & Immunology. DOI: 10.1007/s12016-020-08826-1


- The price of the induced defence against pests: a meta-analysis

Garcia, A., Martinez, M., Diaz, I., Santamaria, M.E. 2021. The Price of the Induced Defense Against Pests: A Meta-Analysis. Frontiers in Plant Science 11, 2285. DOI: 10.3389/fpls.2020.615122


- Genomes of the “Candidatus Actinomarinales” Order: Highly Streamlined Marine Epipelagic Actinobacteria

López-Pérez, M., Haro-Moreno, J.M., Iranzo, J., Rodriguez-Valera, F. 2020. Genomes of the “Candidatus Actinomarinales” Order: Highly Streamlined Marine Epipelagic Actinobacteria. mSystems 5. DOI: 10.1128/mSystems.01041-20


- Standardising gene circuit design

Tas, H., Goñi-Moreno, Á., Lorenzo, V. de 2021. A Standardized Inverter Package Borne by Broad Host Range Plasmids for Genetic Circuit Design in Gram-Negative Bacteria. ACS Synthetic Biology 10, 213–217. DOI: 10.1021/acssynbio.0c00529


- Improving gene circuit design by considering host-circuit interactions

Tas, H., Grozinger, L., Stoof, R., de Lorenzo, V., Goñi-Moreno, Á. 2021. Contextual dependencies expand the re-usability of genetic inverters. Nature Communications 12, 355. DOI: 10.1038/s41467-020-20656-5


- Exploiting gene diversity to identify superior nitrogenase reductase variants to engineer nitrogen fixing plants

Jiang, X., Payá-Tormo, L., Coroian, D., García-Rubio, I., Castellanos-Rueda, R., Eseverri, Á., López-Torrejón, G., Burén, S., Rubio, L.M. 2021. Exploiting genetic diversity and gene synthesis to identify superior nitrogenase NifH protein variants to engineer N 2 -fixation in plants. Communications Biology 4, 1–11. DOI: 10.1038/s42003-020-01536-6


- How plants keep track of time to develop

Perianez-Rodriguez, J., Rodriguez, M., Marconi, M., Bustillo-Avendaño, E., Wachsman, G., Sanchez-Corrionero, A., De Gernier, H., Cabrera, J., Perez-Garcia, P., Gude, I., Saez, A., Serrano-Ron, L., Beeckman, T., Benfey, P.N., Rodríguez-Patón, A., del Pozo, J.C., Wabnik, K., Moreno-Risueno, M.A. 2021. An auxin-regulable oscillatory circuit drives the root clock in Arabidopsis. Science Advances 7, eabd4722. DOI: 10.1126/sciadv.abd4722


- Plant viral nanoparticles as important components in tissue bioengineering

Frías-Sánchez, A.I., Quevedo-Moreno, D.A., Samandari, M., Negrete, J.A.T., Sánchez-Rodríguez, V.H., González-Gamboa, I., Ponz, F., Alvarez, M.M., Santiago, G.T. de 2021. Biofabrication of muscle fibers enhanced with plant viral nanoparticles using surface chaotic flows. Biofabrication. DOI: 10.1088/1758-5090/abd9d7


- Nitric Oxide, an essential intermediate in the plant-herbivore interaction

Arnaiz, A., Rosa-Diaz, I., Romero-Puertas, M.C., Sandalio, L.M., Diaz, I. 2021. Nitric Oxide, an Essential Intermediate in the Plant-Herbivore Interaction. Frontiers in Plant Science 11, 2029. DOI: 10.3389/fpls.2020.620086


- How do plants build on their favorite nutrient?

Ötvös, K., Marconi, M., Vega, A., O’Brien, J., Johnson, A., Abualia, R., Antonielli, L., Montesinos, J.C., Zhang, Y., Tan, S., Cuesta, C., Artner, C., Bouguyon, E., Gojon, A., Friml, J., Gutiérrez, R.A., Wabnik, K., Benková, E. 2021. Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport. The EMBO Journal e106862. DOI: 10.15252/embj.2020106862



- Computational predictions of receptor proteins-glycans interactions triggering plant immunity

Hierro, I. del, Mélida, H., Broyart, C., Santiago, J., Molina, A. 2020. Computational prediction method to decipher receptor-glycoligand interactions in plant immunity. The Plant Journal. DOI: https://doi.org/10.1111/tpj.15133

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- The search for individual interest leads to the emergence of efficient but unequal socioeconomic networks.

Iranzo, J., Pablo-Martí, F., Aguirre, J. 2020. Emergence of complex socioeconomic networks driven by individual and collective interests. Physical Review Research 2, 043352. DOI: 10.1103/PhysRevResearch.2.043352

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- Democratizing precision farming through prediction of the soil microbiome from environmental features

García-Jiménez, B., Muñoz, J., Cabello, S., Medina, J., Wilkinson, M.D. 2020. Predicting microbiomes through a deep latent space. Bioinformatics. DOI: 10.1093/bioinformatics/btaa971


- The reason why European potatoes are not drought tolerant discovered

Gonzales, L.R., Shi, L., Bergonzi, S., Oortwijn, M., Franco‐Zorrilla, J.M., Solano‐Tavira, R., Visser, R.G.F., Abelenda, J.A., Bachem, C.W.B. 2020. Potato CYCLING DOF FACTOR1 and its lncRNA counterpart StFLORE, link tuber development and drought response. The Plant Journal. DOI: https://doi.org/10.1111/tpj.15093


- Signaling for "the holes" in the cell wall through where lateral roots will emerge

Wachsman, G., Zhang, J., Moreno-Risueno, M.A., Anderson, C.T., Benfey, P.N. 2020. Cell wall remodeling and vesicle trafficking mediate the root clock in Arabidopsis. Science 370, 819–823. DOI: 10.1126/science.abb7250


- Production of hydrogen peroxide by the plant contributes to limit a virus infection

Otulak-Kozieł, K., Kozieł, E., Bujarski, J.J., Frankowska-Łukawska, J., Torres, M.A. 2020. Respiratory Burst Oxidase Homologs RBOHD and RBOHF as Key Modulating Components of Response in Turnip Mosaic Virus-Arabidopsis thaliana (L.) Heyhn System. International Journal of Molecular Sciences 21, 8510. DOI: 10.3390/ijms21228510


- Discovery of a new strategy to improve Nitrogen use efficiency in crops

Domínguez-Figueroa, J., Carrillo, L., Renau-Morata, B., Yang, L., Molina, R.-V., Marino, D., Canales, J., Weih, M., Vicente-Carbajosa, J., Nebauer, S.G., Medina, J. 2020. The Arabidopsis Transcription Factor CDF3 Is Involved in Nitrogen Responses and Improves Nitrogen Use Efficiency in Tomato. Frontiers in Plant Science 11, 1825. DOI: 10.3389/fpls.2020.601558


- Unraveling the role of HOP as a central hub in response to stress in plants

Toribio, R., Mangano, S., Fernández-Bautista, N., Muñoz, A., Castellano, M.M. 2020. HOP, a Co-chaperone Involved in Response to Stress in Plants. Frontiers in Plant Science 11, 1657. DOI: 10.3389/fpls.2020.591940


- Designing protein dimerization for programming genetic circuits

Stoof, R., Goñi-Moreno, Á. 2020. Modelling co-translational dimerization for programmable nonlinearity in synthetic biology. Journal of The Royal Society Interface 17, 20200561. DOI: 10.1098/rsif.2020.0561


- Population genomics and the ecology and evolution of plant virus emergence

McLeish, M., Fraile, A., Garcia-Arenal, F. 2020. Population genomics of plant viruses: the ecology and evolution of virus emergence. Phytopathology®. DOI: 10.1094/PHYTO-08-20-0355-FI


- Histone demethylases as counterbalance to epigenetic silencing in plants

Crevillén, P. 2020. Histone Demethylases as Counterbalance to H3K27me3 Silencing in Plants. iScience 23, 101715. DOI: 10.1016/j.isci.2020.101715


- Comparative transcriptomics reveals hidden issues in the plant/pest interaction

Santamaria, ME., Garcia, A., Arnaiz, A., Rosa-Diaz, I ., Romero-Hernandez, G., Diaz, I., Martinez, M. 2020. Comparative transcriptomics reveals hidden issues in the plant response to arthropod herbivores. Journal of Integrative Plant Biology. DOI: 10.1111/jipb.13026


- CBGP researchers disclose a novel nexus involved in balancing growth with plant stress responses

Pérez-Alonso, M.-M., Ortiz-García, P., Moya-Cuevas, J., Lehmann, T., Sánchez-Parra, B., Björk, R.G., Karim, S., Amirjani, M.R., Aronsson, H., Wilkinson, M.D., Pollmann, S. 2020. Endogenous indole-3-acetamide levels contribute to the crosstalk between auxin and ABA, and trigger plant stress responses in Arabidopsis thaliana. Journal of Experimental Botany eraa485. DOI: 10.1093/jxb/eraa485


- Chromatin dynamics contribute to the spatio-temporal expression pattern of virulence genes in a fungal plant pathogen

Meile, L., Peter, J., Puccetti, G., Alassimone, J., McDonald, B.A., Sánchez-Vallet, A. 2020. Chromatin Dynamics Contribute to the Spatiotemporal Expression Pattern of Virulence Genes in a Fungal Plant Pathogen. mBio 11. DOI: 10.1128/mBio.02343-20


- From the lab to the field: the fungal endophyte Colletotrichum tofieldae increases yield of tomato and maize crops

Díaz-González, S., Marín, P., Sánchez, R., Arribas, C., Kruse, J., González-Melendi, P., Brunner, F., Sacristán, S. 2020. Mutualistic Fungal Endophyte Colletotrichum tofieldiae Ct0861 Colonizes and Increases Growth and Yield of Maize and Tomato Plants. Agronomy 10, 1493. DOI: 10.3390/agronomy10101493


- CBGP researchers discover a novel group of plant cell wall-derived elicitors

Mélida, H., Bacete, L., Ruprecht, C., Rebaque, D., del Hierro, I., López, G., Brunner, F., Pfrengle, F., Molina, A. 2020. Arabinoxylan-Oligosaccharides Act as Damage Associated Molecular Patterns in Plants Regulating Disease Resistance. Frontiers in Plant Science 11, 1210. DOI: 10.3389/fpls.2020.01210


- Plant Allergens research group develops a new system for food allergy diagnosis

Espinosa, R.L., Garrido-Arandia, M., Romero-Sahagun, A., Herreros, P., Tramarin, L., Laguna, M.F., Díaz-Perales, A., Holgado, M. 2020. A new optical interferometric-based in vitro detection system for the specific IgE detection in serum of the main peach allergen. Biosensors and Bioelectronics 169, 112641. DOI: 10.1016/j.bios.2020.112641


- Blue light perception by epiphytic Pseudomonas syringae drives chemoreceptor expression enabling efficient plant infection

Santamaría‐Hernando, S., Cerna‐Vargas, J.P., Martínez‐García, P.M., Polanco, S. de F., Nebreda, S., Rodríguez‐Palenzuela, P., Rodríguez‐Herva, J.J., López‐Solanilla, E. 2020. Blue-light perception by epiphytic Pseudomonas syringae drives chemoreceptor expression, enabling efficient plant infection. Molecular Plant Pathology. DOI: 10.1111/mpp.13001


- Described a new plant immunity pathway in tomato that confers enhanced resistance against the bacterium Pseudomonas syringae

Téllez, J., Muñoz-Barrios, A., Sopeña-Torres, S., Martín-Forero, A.F., Ortega, A., Pérez, R., Sanz, Y., Borja, M., de Marcos, A., Nicolas, M., Jahrmann, T., Mena, M., Jordá, L., Molina, A. 2020. YODA Kinase Controls a Novel Immune Pathway of Tomato Conferring Enhanced Disease Resistance to the Bacterium Pseudomonas syringae. Frontiers in Plant Science 11, 1569. DOI: 10.3389/fpls.2020.584471


- Computational design of multicellular consortia

Brown, B., Bartley, B., Beal, J., Bird, J.E., Goñi-Moreno, Á., McLaughlin, J.A., Mısırlı, G., Roehner, N., Skelton, D.J., Poh, C.L., Ofiteru, I.D., James, K., Wipat, A. 2020. Capturing Multicellular System Designs Using Synthetic Biology Open Language (SBOL). ACS synthetic biology 9, 2410–2417. DOI: 10.1021/acssynbio.0c00176


- 2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales

Kuhn, J.H., Adkins, S., Alioto, D., Alkhovsky, S.V., Amarasinghe, G.K., Anthony, S.J., Avšič-Županc, T., Ayllón, M.A., Bahl, J., Balkema-Buschmann, A., Ballinger, M.J., Bartonička, T., Basler, C., Bavari, S., Beer, M., Bente, D.A., Bergeron, É., Bird, B.H., Blair, C., Blasdell, K.R., Bradfute, S.B., Breyta, R., Briese, T., Brown, P.A., Buchholz, U.J., Buchmeier, M.J., Bukreyev, A., Burt, F., Buzkan, N., Calisher, C.H., Cao, M., Casas, I., Chamberlain, J., Chandran, K., Charrel, R.N., Chen, B., Chiumenti, M., Choi, I.-R., Clegg, J.C.S., Crozier, I., da Graça, J.V., Dal Bó, E., Dávila, A.M.R., de la Torre, J.C., de Lamballerie, X., de Swart, R.L., Di Bello, P.L., Di Paola, N., Di Serio, F., Dietzgen, R.G., Digiaro, M., Dolja, V.V., Dolnik, O., Drebot, M.A., Drexler, J.F., Dürrwald, R., Dufkova, L., Dundon, W.G., Duprex, W.P., Dye, J.M., Easton, A.J., Ebihara, H., Elbeaino, T., Ergünay, K., Fernandes, J., Fooks, A.R., Formenty, P.B.H., Forth, L.F., Fouchier, R.A.M., Freitas-Astúa, J., Gago-Zachert, S., Gāo, G.F., García, M.L., García-Sastre, A., Garrison, A.R., Gbakima, A., Goldstein, T., Gonzalez, J.-P.J., Griffiths, A., Groschup, M.H., Günther, S., Guterres, A., Hall, R.A., Hammond, J., Hassan, M., Hepojoki, J., Hepojoki, S., Hetzel, U., Hewson, R., Hoffmann, B., Hongo, S., Höper, D., Horie, M., Hughes, H.R., Hyndman, T.H., Jambai, A., Jardim, R., Jiāng, D., Jin, Q., Jonson, G.B., Junglen, S., Karadağ, S., Keller, K.E., Klempa, B., Klingström, J., Kobinger, G., Kondō, H., Koonin, E.V., Krupovic, M., Kurath, G., Kuzmin, I.V., Laenen, L., Lamb, R.A., Lambert, A.J., Langevin, S.L., Lee, B., Lemos, E.R.S., Leroy, E.M., Li, D., Lǐ, J., Liang, M., Liú, W., Liú, Y., Lukashevich, I.S., Maes, P., Marciel de Souza, W., Marklewitz, M., Marshall, S.H., Martelli, G.P., Martin, R.R., Marzano, S.-Y.L., Massart, S., McCauley, J.W., Mielke-Ehret, N., Minafra, A., Minutolo, M., Mirazimi, A., Mühlbach, H.-P., Mühlberger, E., Naidu, R., Natsuaki, T., Navarro, B., Navarro, J.A., Netesov, S.V., Neumann, G., Nowotny, N., Nunes, M.R.T., Nylund, A., Økland, A.L., Oliveira, R.C., Palacios, G., Pallas, V., Pályi, B., Papa, A., Parrish, C.R., Pauvolid-Corrêa, A., Pawęska, J.T., Payne, S., Pérez, D.R., Pfaff, F., Radoshitzky, S.R., Rahman, A., Ramos-González, P.L., Resende, R.O., Reyes, C.A., Rima, B.K., Romanowski, V., Robles Luna, G., Rota, P., Rubbenstroth, D., Runstadler, J.A., Ruzek, D., Sabanadzovic, S., Salát, J., Sall, A.A., Salvato, M.S., Sarpkaya, K., Sasaya, T., Schwemmle, M., Shabbir, M.Z., Shí, X., Shí, Z., Shirako, Y., Simmonds, P., Širmarová, J., Sironi, M., Smither, S., Smura, T., Song, J.-W., Spann, K.M., Spengler, J.R., Stenglein, M.D., Stone, D.M., Straková, P., Takada, A., Tesh, R.B., Thornburg, N.J., Tomonaga, K., Tordo, N., Towner, J.S., Turina, M., Tzanetakis, I., Ulrich, R.G., Vaira, A.M., van den Hoogen, B., Varsani, A., Vasilakis, N., Verbeek, M., Wahl, V., Walker, P.J., Wang, H., Wang, J., Wang, X., Wang, L.-F., Wèi, T., Wells, H., Whitfield, A.E., Williams, J.V., Wolf, Y.I., Wú, Z., Yang, X., Yáng, X., Yu, X., Yutin, N., Zerbini, F.M., Zhang, T., Zhang, Y.-Z., Zhou, G., Zhou, X. 2020. 2020 taxonomic update for phylum Negarnaviricota (Riboviria: Orthornavirae), including the large orders Bunyavirales and Mononegavirales. Archives of Virology. DOI: 10.1007/s00705-020-04731-2


- Editorial: Origins and Domestication of the Grape

Grassi, F., Arroyo-Garcia, R. 2020. Editorial: Origins and Domestication of the Grape. Frontiers in Plant Science 11, 1176. DOI: 10.3389/fpls.2020.01176


- Are Physicochemical Properties Shaping the Allergenic Potency of Plant Allergens?

Costa, J., Bavaro, S.L., Benedé, S., Diaz-Perales, A., Bueno-Diaz, C., Gelencser, E., Klueber, J., Larré, C., Lozano-Ojalvo, D., Lupi, R., Mafra, I., Mazzucchelli, G., Molina, E., Monaci, L., Martín-Pedraza, L., Piras, C., Rodrigues, P.M., Roncada, P., Schrama, D., Cirkovic-Velickovic, T., Verhoeckx, K., Villa, C., Kuehn, A., Hoffmann-Sommergruber, K., Holzhauser, T. 2020. Are Physicochemical Properties Shaping the Allergenic Potency of Plant Allergens?. Clinical Reviews in Allergy & Immunology. DOI: 10.1007/s12016-020-08810-9


- MYB28 AND MYB29 shape ammonium stress responses by regulating Fe homeostasis

Coleto, I., Bejarano, I., Marín‐Peña, A.J., Medina, J., Rioja, C., Burow, M., Marino, D. 2020. Arabidopsis thaliana transcription factors MYB28 AND MYB29 shape ammonium stress responses by regulating fe homeostasis. New Phytologist. DOI: 10.1111/nph.16918


- MtCOPT2 is a mycorrhiza-specific copper transporter

Senovilla, M., Abreu, I., Escudero, V., Cano, C., Bago, A., Imperial, J., González-Guerrero, M. 2020. MtCOPT2 is a Cu+ transporter specifically expressed in Medicago truncatula mycorrhizal roots. Mycorrhiza. DOI: 10.1007/s00572-020-00987-3


- Which genes determine fungal life-style in the interaction with plants?

Muñoz-Barrios, A., Sopeña-Torres, S., Ramos, B., López, G., Del Hierro García, I., Díaz-González, S., González-Melendi, P., Mélida, H., Fernández-Calleja, V., Mixão, V., Martín Dacal, M., Marcet-Houben, M., Gabaldón, T., Sacristan, S., Molina, A. 2020. Differential expression of fungal genes determines the lifestyle of Plectosphaerella strains during Arabidopsis thaliana colonization. Molecular Plant-Microbe Interactions®. DOI: 10.1094/MPMI-03-20-0057-R


- Precision transcriptomics of viral foci reveals the spatial regulation of immune‐signaling genes and identifies RBOHD as an important player in the incompatible interaction between potato virus Y and potato

Lukan, T., Pompe‐Novak, M., Baebler, Š., Tušek‐Žnidarič, M., Kladnik, A., Križnik, M., Blejec, A., Zagorščak, M., Stare, K., Dušak, B., Coll, A., Pollmann, S., Morgiewicz, K., Hennig, J., Gruden, K. 2020. Precision transcriptomics of viral foci reveals the spatial regulation of immune-signaling genes and identifies RBOHD as an important player in the incompatible interaction between potato virus Y and potato. The Plant Journal. DOI: 10.1111/tpj.14953


- Electron density in biomacromolecules described through machine learning

Cuevas-Zuviría, B., Pacios, L.F. 2020. Analytical Model of Electron Density and Its Machine Learning Inference. Journal of Chemical Information and Modeling 60, 3831–3842. DOI: 10.1021/acs.jcim.0c00197


- Dsup, a protein unique to tardigrades, protects DNA from radiation: How does it do it?

Mínguez-Toral, M., Cuevas-Zuviría, B., Garrido-Arandia, M., Pacios, L.F. 2020. A computational structural study on the DNA-protecting role of the tardigrade-unique Dsup protein. Scientific Reports 10, 13424. DOI: 10.1038/s41598-020-70431-1


- Metal nicotianamine transporter MtYSL3 delivers iron and zinc for nitrogen fixation

Castro-Rodríguez, R., Abreu, I., Reguera, M., Novoa-Aponte, L., Mijovilovich, A., Escudero, V., Jiménez-Pastor, F.J., Abadía, J., Wen, J., Mysore, K.S., Álvarez-Fernández, A., Küpper, H., Imperial, J., González-Guerrero, M. 2020. Medicago truncatula Yellow Stripe1-Like3 gene is involved in vascular delivery of transition metals to root nodules. Journal of Experimental Botany. DOI: 10.1093/jxb/eraa390


- Novel method to select silenced lines in model moss P. patens

Orr, R.G., Foley, S.J., Sherman, C.A., Abreu, I., Galotto, G., Liu, B., Gonzalez-Guerrero, M., Vidali, L. 2020. Robust survival-based RNAi of gene families using in tandem silencing of adenine phosphoribosyltransferase. Plant Physiology. DOI: 10.1104/pp.20.00865


- Saving time maintaining reliability: a new method for quantification of Tetranychus urticae damage in Arabidopsis whole rosettes

Ojeda-Martinez, D., Martinez, M., Diaz, I., Santamaria, M.E. 2020. Saving time maintaining reliability: a new method for quantification of Tetranychus urticae damage in Arabidopsis whole rosettes. BMC Plant Biology 20, 397. DOI: 10.1186/s12870-020-02584-0


- Combining Partially Overlapping Multi-Omics Data in Databases Using Relationship Matrices

Akdemir, D., Knox, R., Isidro y Sánchez, J. 2020. Combining Partially Overlapping Multi-Omics Data in Databases Using Relationship Matrices. Frontiers in Plant Science 11, 947. DOI: 10.3389/fpls.2020.00947


- Analysis of tomato Responses to Sulfur Limitation

Canales, J., Uribe, F., Henríquez-Valencia, C., Lovazzano, C., Medina, J., Vidal, E.A. 2020. Transcriptomic analysis at organ and time scale reveals gene regulatory networks controlling the sulfate starvation response of Solanum lycopersicum. BMC Plant Biology 20, 385. DOI: 10.1186/s12870-020-02590-2


- How virus infections alter plant developmental traits. A case study of flower stalk elongation

López‐González, S., Navarro, J.A., Pacios, L.F., Sardaru, P., Pallás, V., Sánchez, F., Ponz, F. 2020. Association between flower stalk elongation, an Arabidopsis developmental trait, and the subcellular location and movement dynamics of the nonstructural protein P3 of Turnip mosaic virus. Molecular Plant Pathology. DOI: 10.1111/mpp.12976


- Cow’s milk protein β-lactoglobulin confers resilience against allergy by targeting complexed iron into immune cells

Roth-Walter, F., Afify, S.M., Pacios, L.F., Blokhuis, B.R., Redegeld, F., Regner, A., Petje, L.-M., Fiocchi, A., Untersmayr, E., Dvorak, Z., Hufnagl, K., Pali-Schöll, I., Jensen-Jarolim, E. 2020. Cow’s milk protein β-lactoglobulin confers resilience against allergy by targeting complexed iron into immune cells. Journal of Allergy and Clinical Immunology. DOI: 10.1016/j.jaci.2020.05.023


- The stoichiometric state of the SHR-SCR complex as a modulator of divisions of the root stem cell niche

Clark, N.M., Fisher, A.P., Berckmans, B., Broeck, L.V. den, Nelson, E.C., Nguyen, T.T., Bustillo-Avendaño, E., Zebell, S.G., Moreno-Risueno, M.A., Simon, R., Gallagher, K.L., Sozzani, R. 2020. Protein complex stoichiometry and expression dynamics of transcription factors modulate stem cell division. Proceedings of the National Academy of Sciences 117, 15332–15342. DOI: 10.1073/pnas.2002166117

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- Host Range Determinants of Pseudomonas savastanoi Pathovars of Woody Hosts Revealed by Comparative Genomics and Cross-Pathogenicity Tests

Moreno-Pérez, A., Pintado, A., Murillo, J., Caballo-Ponce, E., Tegli, S., Moretti, C., Rodríguez-Palenzuela, P., Ramos, C. 2020. Host Range Determinants of Pseudomonas savastanoi Pathovars of Woody Hosts Revealed by Comparative Genomics and Cross-Pathogenicity Tests. Frontiers in Plant Science 11, 973. DOI: 10.3389/fpls.2020.00973


- Ecological fitting is the forerunner to diversification in a plant virus with broad host range

Peláez, A., McLeish, M.J., Paswan, R.R., Dubai, B., Fraile, A., García‐Arenal, F. 2020. Ecological fitting is the forerunner to diversification in a plant virus with broad host range. Journal of Evolutionary Biology. DOI: 10.1111/jeb.13672


- SlCDF4 as a new key factor controlling tomato size and composition

Renau-Morata, B., Carrillo, L., Cebolla-Cornejo, J., Molina, R.V., Martí, R., Domínguez-Figueroa, J., Vicente-Carbajosa, J., Medina, J., Nebauer, S.G. 2020. The targeted overexpression of SlCDF4 in the fruit enhances tomato size and yield involving gibberellin signalling. Scientific Reports 10, 10645. DOI: 10.1038/s41598-020-67537-x


- Genome-wide association mapping of Fusarium langsethiae infection and mycotoxin accumulation in oat (Avena sativa L.)

Isidro‐Sánchez, J., Cusack, K.D., Verheecke‐Vaessen, C., Kahla, A., Bekele, W., Doohan, F., Magan, N., Medina, A. 2020. Genome-wide association mapping of Fusarium langsethiae infection and mycotoxin accumulation in oat (Avena sativa L.). The Plant Genome e20023. DOI: 10.1002/tpg2.20023


- Classifying the certainty of scholarly text

Prieto, M., Deus, H., Waard, A. de, Schultes, E., García-Jiménez, B., Wilkinson, M.D. 2020. Data-driven classification of the certainty of scholarly assertions. PeerJ 8, e8871. DOI: 10.7717/peerj.8871


- Determination of the domains of Turnip mosaic virus coat protein indispensable for the formation of the viral particle

Yuste-Calvo, C., Ibort, P., Sánchez, F., Ponz, F. 2020. Turnip Mosaic Virus Coat Protein Deletion Mutants Allow Defining Dispensable Protein Domains for ‘in Planta’ eVLP Formation. Viruses 12, 661. DOI: 10.3390/v12060661


- How roots of crops adapt to climate change?

Calleja-Cabrera, J., Boter, M., Oñate-Sánchez, L., Pernas, M. 2020. Root Growth Adaptation to Climate Change in Crops. Frontiers in Plant Science 11, 544. DOI: 10.3389/fpls.2020.00544


- Why do grass pollen patients suffer from asthma exarcerbation in autumn?

Hernández‐Ramírez, G., Pazos‐Castro, D., Torrijos, E.G., Montalvo, A.Y., Romero‐Sahagun, A., González‐Klein, Z., Jimeno‐Nogales, L., Escribese, M.M., Ortega, A.E., Nuñez‐Borque, E., Orvay, L.B., Esteban, V., Brito, F.F., Barber, D., Tome‐Amat, J., Garrido‐Arandia, M., Díaz‐Perales, A. 2020. Group 1 allergens, transported by mold spores, induce asthma exacerbation in a mouse model. Allergy. DOI: 10.1111/all.14347


- Atomic structure of the most critical protein for global nitrogen fixation determined

Fajardo, A.S., Legrand, P., Payá-Tormo, L., Martin, L., Pellicer Martı́nez, M.T., Echavarri-Erasun, C., Vernède, X., Rubio, L.M., Nicolet, Y. 2020. Structural Insights into the Mechanism of the Radical SAM Carbide Synthase NifB, a Key Nitrogenase Cofactor Maturating Enzyme. Journal of the American Chemical Society. DOI: 10.1021/jacs.0c02243


- Structural and functional analysis of the PII nitrogen sensor in maritime pine

Llebrés, M.T., Pascual, M.B., Valle, C., de la Torre, F.N., Valderrama-Martin, J.M., Gómez, L., Avila, C., Cánovas, F.M. 2020. Structural and Functional Characteristics of Two Molecular Variants of the Nitrogen Sensor PII in Maritime Pine. Frontiers in Plant Science 11, 823. DOI: 10.3389/fpls.2020.00823


- The regulation of germination: an updated guide for researchers

Carrera-Castaño, G., Calleja-Cabrera, J., Pernas, M., Gómez, L., Oñate-Sánchez, L. 2020. An Updated Overview on the Regulation of Seed Germination. Plants 9, 703. DOI: 10.3390/plants9060703


- Seed dormancy and chemical modifications of nucleic acids

Katsuya-Gaviria, K., Caro, E., Carrillo-Barral, N., Iglesias-Fernández, R. 2020. Reactive Oxygen Species (ROS) and Nucleic Acid Modifications During Seed Dormancy. Plants 9, 679. DOI: 10.3390/plants9060679


- Fungal Endophytes Enhance the Photoprotective Mechanisms and Photochemical Efficiency in the Antarctic Colobanthus quitensis (Kunth) Bartl. Exposed to UV-B Radiation

Barrera, A., Hereme, R., Ruiz-Lara, S., Larrondo, L.F., Gundel, P.E., Pollmann, S., Molina-Montenegro, M.A., Ramos, P. 2020. Fungal Endophytes Enhance the Photoprotective Mechanisms and Photochemical Efficiency in the Antarctic Colobanthus quitensis (Kunth) Bartl. Exposed to UV-B Radiation. Frontiers in Ecology and Evolution 8, 122. DOI: 10.3389/fevo.2020.00122


- Tolerance: A key plant defense against pathogens

Pagán, I., García-Arenal, F. 2020. Tolerance of Plants to Pathogens: A Unifying View. Annual Review of Phytopathology. DOI: 10.1146/annurev-phyto-010820-012749


- Trade-offs between host tolerances to different pathogens in plant–virus interactions

Montes, N., Vijayan, V., Pagán, I. 2020. Trade-offs between host tolerances to different pathogens in plant–virus interactions. Virus Evolution 6. DOI: 10.1093/ve/veaa019


- A seven-membered cell wall related transglycosylase gene family in Aspergillus niger is relevant for cell wall integrity in cell wall mutants with reduced α-glucan or galactomannan

van Leeuwe, T.M., Wattjes, J., Niehues, A., Forn-Cuní, G., Geoffrion, N., Mélida, H., Arentshorst, M., Molina, A., Tsang, A., Meijer, A.H., Moerschbacher, B.M., Punt, P.J., Ram, A.F.J. 2020. A seven-membered cell wall related transglycosylase gene family in Aspergillus niger is relevant for cell wall integrity in cell wall mutants with reduced α-glucan or galactomannan. The Cell Surface 6, 100039. DOI: 10.1016/j.tcsw.2020.100039


- Taxonomic and functional analysis of soil microbial communities in a mining site across a metal(loid) contamination gradient

Navas, M., Pérez‐Esteban, J., Torres, M.A., Hontoria, C., Moliner, A. 2020. Taxonomic and functional analysis of soil microbial communities in a mining site across a metal(loid) contamination gradient. European Journal of Soil Science. DOI: 10.1111/ejss.12979


- Identified a transporter that delivers iron to symbiotic nitrogen-fixing bacteria in root nodules

Escudero, V., Abreu, I., Tejada‐Jiménez, M., Rosa‐Núñez, E., Quintana, J., Prieto, R.I., Larue, C., Wen, J., Villanova, J., Mysore, K.S., Argüello, J.M., Castillo‐Michel, H., Imperial, J., González‐Guerrero, M. 2020. Medicago truncatula Ferroportin2 mediates iron import into nodule symbiosomes. New Phytologist. DOI: 10.1111/nph.16642


- A programming language for the design of synthetic biological circuits

Crowther, M., Grozinger, L., Pocock, M., Taylor, C.P.D., McLaughlin, J.A., Mısırlı, G., Bartley, B.A., Beal, J., Goñi-Moreno, A., Wipat, A. 2020. ShortBOL: A Language for Scripting Designs for Engineered Biological Systems Using Synthetic Biology Open Language (SBOL). ACS Synthetic Biology 9, 962–966. DOI: 10.1021/acssynbio.9b00470


- The Quest for Orthologs benchmark service and consensus calls in 2020

Altenhoff, A.M., Garrayo-Ventas, J., Cosentino, S., Emms, D., Glover, N.M., Hernández-Plaza, A., Nevers, Y., Sundesha, V., Szklarczyk, D., Fernández, J.M., Codó, L., Gelpi, J.L., Huerta-Cepas, J., Iwasaki, W., Kelly, S., Lecompte, O., Muffato, M., Martin, M.J., Capella-Gutierrez, S., Thomas, P.D., Sonnhammer, E., Dessimoz, C. 2020. The Quest for Orthologs benchmark service and consensus calls in 2020. Nucleic Acids Research. DOI: 10.1093/nar/gkaa308


- The standardization of synthetic biological systems

Beal, J., Goñi-Moreno, A., Myers, C., Hecht, A., de Vicente, M. del C., Parco, M., Schmidt, M., Timmis, K., Baldwin, G., Friedrichs, S., Freemont, P., Kiga, D., Ordozgoiti, E., Rennig, M., Rios, L., Tanner, K., de Lorenzo, V., Porcar, M. 2020. The long journey towards standards for engineering biosystems. EMBO reports e50521. DOI: 10.15252/embr.202050521


- Botourmiaviridae: a new family of viruses

Ayllón, M.A., Turina, M., Xie, J., Nerva, L., Marzano, S.-Y.L., Donaire, L., Jiang, D., Consortium, I.R. 2020. ICTV Virus Taxonomy Profile: Botourmiaviridae. Journal of General Virology. DOI: 10.1099/jgv.0.001409


- Game-Theoretical Modeling of Interviral Conflicts Mediated by Mini-CRISPR Arrays

Iranzo, J., Faure, G., Wolf, Y.I., Koonin, E.V. 2020. Game-Theoretical Modeling of Interviral Conflicts Mediated by Mini-CRISPR Arrays. Frontiers in Microbiology 11, 381. DOI: 10.3389/fmicb.2020.00381


- Progress toward the isolation of "hidden" cell populations of dark-growing organs

González-García, M.-P., Bustillo-Avendaño, E., Sanchez-Corrionero, A., del Pozo, J.C., Moreno-Risueno, M.A. 2020. Fluorescence-Activated Cell Sorting Using the D-Root Device and Optimization for Scarce and/or Non-Accessible Root Cell Populations. Plants 9, 499. DOI: 10.3390/plants9040499


- Plant defences against Tetranychus urticae: mind the gaps

Santamaria, M.E., Arnaiz, A., Rosa-Diaz, I., González-Melendi, P., Romero-Hernandez, G., Ojeda-Martinez, D.A., Garcia, A., Contreras, E., Martinez, M., Diaz, I. 2020. Plant Defenses Against Tetranychus urticae: Mind the Gaps. Plants 9, 464. DOI: 10.3390/plants9040464


- Computational analyses unveil key amino acids of lipid antigen-presenting proteins in the initial stages of allergen recognition

Cuevas-Zuviría, B., Mínguez-Toral, M., Díaz-Perales, A., Garrido-Arandia, M., Pacios, L.F. 2020. Structural Dynamics of the Lipid Antigen-Binding Site of CD1d Protein. Biomolecules 10, 532. DOI: 10.3390/biom10040532


- Chitin triggers calcium-mediated immune response in model moss P. patens

Galotto, G., Abreu, I., Sherman, C.A., Liu, B., Gonzalez-Guerrero, M., Vidali, L. 2020. Chitin Triggers Calcium-mediated Immune Response in the Plant Model Physcomitrella patens. Molecular Plant-Microbe Interactions®. DOI: 10.1094/MPMI-03-20-0064-R


- Structural clues for unraveling the first stage of lipid-antigen presentation in immune responses to allergies

Cuevas-Zuviría, B., Mínguez-Toral, M., Díaz-Perales, A., Garrido-Arandia, M., Pacios, L.F. 2020. Dynamic plasticity of the lipid antigen-binding site of CD1d is crucially favoured by acidic pH and helper proteins. Scientific Reports 10, 5714. DOI: 10.1038/s41598-020-62833-y


- Insights into the function of the new chromatin remodeling complex in plants

Espinosa-Cores, L., Bouza-Morcillo, L., Barrero-Gil, J., Jiménez-Suárez, V., Lázaro, A., Piqueras, R., Jarillo, J.A., Piñeiro, M. 2020. Insights Into the Function of the NuA4 Complex in Plants. Frontiers in Plant Science 11, 125. DOI: 10.3389/fpls.2020.00125


- Discovery of Pru p 9, a new allergen from peach tree pollen elliciting respirato

Blanca, M., Puche, L.V., Garrido-Arandia, M., Martin-Pedraza, L., Sahagún, A.R., López-Sánchez, J.D., Galán, C., Marin, A., Villaba, M., Díaz-Perales, A., Somoza, M.L. 2020. Pru p 9, a new allergen eliciting respiratory symptoms in subjects sensitized to peach tree pollen. PLOS ONE 15, e0230010. DOI: 10.1371/journal.pone.0230010


- Root-knot nematodes induce gall formation by recruiting developmental pathways of post-embryonic organogenesis and regeneration to promote transient pluripotency

Olmo, R., Cabrera, J., Díaz‐Manzano, F.E., Ruiz‐Ferrer, V., Barcala, M., Ishida, T., García, A., Andrés, M.F., Ruiz‐Lara, S., Verdugo, I., Ochoa, M.P., Fukaki, H., del Pozo, J.C., Moreno‐Risueno, M.Á., Kyndt, T., Gheysen, G., Fenoll, C., Sawa, S., Escobar, C. 2020. Root-knot nematodes induce gall formation by recruiting developmental pathways of post-embryonic organogenesis and regeneration to promote transient pluripotency. New Phytologist. DOI: 10.1111/nph.16521


- Plant viral nanoparticles functionalized for antimicrobial and antibiofilm activities

Velázquez-Lam, E., Imperial, J., Ponz, F. 2020. Polyphenol-Functionalized Plant Viral-Derived Nanoparticles Exhibit Strong Antimicrobial and Antibiofilm Formation Activities. ACS Applied Bio Materials. DOI: 10.1021/acsabm.9b01161


- Pathogen emergence: virus infections cannot be isolated from their environment

Valverde, S., Vidiella, B., Montañez, R., Fraile, A., Sacristán, S., García-Arenal, F. 2020. Coexistence of nestedness and modularity in host–pathogen infection networks. Nature Ecology & Evolution. DOI: 10.1038/s41559-020-1130-9


- Crosstalk of auxin and brassinosteroid pathways through intracellular auxin transpor

Sun, L., Feraru, E., Feraru, M.I., Waidmann, S., Wang, W., Passaia, G., Wang, Z.-Y., Wabnik, K., Kleine-Vehn, J. 2020. PIN-LIKES Coordinate Brassinosteroid Signaling with Nuclear Auxin Input in Arabidopsis thaliana. Current Biology. DOI: 10.1016/j.cub.2020.02.002


- The poly(A) site selection and the salicylic acid signaling modulate the responses to low nitrogen availability

Conesa, C.M., Saez, A., Navarro-Neila, S., de Lorenzo, L., Hunt, A.G., Sepúlveda, E.B., Baigorri, R., Garcia-Mina, J.M., Zamarreño, A.M., Sacristán, S., del Pozo, J.C. 2020. Alternative Polyadenylation and Salicylic Acid Modulate Root Responses to Low Nitrogen Availability. Plants 9, 251. DOI: 10.3390/plants9020251


- New functions of CDF factors in the regulation of plant growth and metabolism

Renau-Morata, B., Carrillo, L., Dominguez-Figueroa, J., Vicente-Carbajosa, J., Molina, R.V., G. Nebauer, S., Medina, J. 2020. CDF transcription factors: plant regulators to deal with extreme environmental conditions. Journal of Experimental Botany. DOI: 10.1093/jxb/eraa088


- CBGP researchers discover a gene that regulates plants’ disease resistance and cell wall composition

Bacete, L., Mélida, H., López, G., Dabos, P., Tremousaygue, D., Denancé, N., Miedes, E., Bulone, V., Goffner, D., Molina, A. 2020. Arabidopsis Response Regulator 6 (ARR6) modulates plant cell wall composition and disease resistance. Molecular Plant-Microbe Interactions®. DOI: 10.1094/MPMI-12-19-0341-R


- Nicotianamine-enabled iron delivery for nitrogen fixation

Escudero, V., Abreu, I., del Sastre, E., Tejada-Jiménez, M., Larue, C., Novoa-Aponte, L., Castillo-González, J., Wen, J., Mysore, K.S., Abadía, J., Argüello, J.M., Castillo-Michel, H., Álvarez-Fernández, A., Imperial, J., González-Guerrero, M. 2020. Nicotianamine Synthase 2 Is Required for Symbiotic Nitrogen Fixation in Medicago truncatula Nodules. Frontiers in Plant Science 10, 1780. DOI: 10.3389/fpls.2019.01780


- The weakening of endosperm cell walls is mediated by mannanases secreted from the aleurone layer of germinating barley seeds

Iglesias-Fernández, R., Pastor-Mora, E., Vicente-Carbajosa, J., Carbonero, P. 2020. A Possible Role of the Aleurone Expressed Gene HvMAN1 in the Hydrolysis of the Cell Wall Mannans of the Starchy Endosperm in Germinating Hordeum vulgare L. Seeds. Frontiers in Plant Science 10, 1706. DOI: 10.3389/fpls.2019.01706


- Ecosystem biodiversity modulates plant virus incidence

Rodríguez-Nevado, C., G. Gavilán, R., Pagán, I. 2019. Host Abundance and Identity Determine the Epidemiology and Evolution of a Generalist Plant Virus in a Wild Ecosystem. Phytopathology™ 110, 94–105. DOI: 10.1094/PHYTO-07-19-0271-FI


- Designing new molecular breeding tools for strategies of drought tolerance in Vicia

De la Rosa, L., Zambrana, E., Ramirez-Parra, E. 2020. Molecular bases for drought tolerance in common vetch: designing new molecular breeding tools. BMC Plant Biology 20, 71. DOI: 10.1186/s12870-020-2267-z


- Proof that chloroplasts can host active Nitrogenase

Eseverri, Á., López‐Torrejón, G., Jiang, X., Burén, S., Rubio, L.M., Caro, E. 2020. Use of synthetic biology tools to optimize the production of active nitrogenase Fe protein in chloroplasts of tobacco leaf cells. Plant Biotechnology Journal. DOI: 10.1111/pbi.13347


- Moonlighting function of Phytochelatin synthase 1 in extracellular defense against fungal pathogens

Hematy, K., Lim, M., Cherk, C., Piślewska-Bednarek, M., Rodríguez, C.S., Stein, M., Fuchs, R., Klapprodt, C., Lipka, V., Molina, A., Grill, E., Schulze-Lefert, P., Bednarek, P., Somerville, S. 2020. Moonlighting function of Phytochelatin synthase 1 in extracellular defense against fungal pathogens. Plant Physiology. DOI: 10.1104/pp.19.01393


- Harnessing beneficial plant-fungus interactions to confront climate change effects

Pérez-Alonso, M.-M., Guerrero-Galán, C., Scholz, S.S., Kiba, T., Sakakibara, H., Ludwig-Müller, J., Krapp, A., Oelmüller, R., Vicente-Carbajosa, J., Pollmann, S. 2020. Harnessing symbiotic plant–fungus interactions to unleash hidden forces from extreme plant ecosystems. Journal of Experimental Botany. DOI: 10.1093/jxb/eraa040


- proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genome

Mende, D.R., Letunic, I., Maistrenko, O.M., Schmidt, T.S.B., Milanese, A., Paoli, L., Hernández-Plaza, A., Orakov, A.N., Forslund, S.K., Sunagawa, S., Zeller, G., Huerta-Cepas, J., Coelho, L.P., Bork, P. 2020. proGenomes2: an improved database for accurate and consistent habitat, taxonomic and functional annotations of prokaryotic genomes. Nucleic Acids Research 48, D621–D625. DOI: 10.1093/nar/gkz1002


- Biosynthesis of Nitrogenase Cofactors

Burén, S., Jiménez-Vicente, E., Echavarri-Erasun, C., Rubio, L.M. 2020. Biosynthesis of Nitrogenase Cofactors. Chemical Reviews. DOI: 10.1021/acs.chemrev.9b00489


- Biocontrol capabilities of the genus Serratia for sustainable agriculture: Enterobacteria with a unique secondary metabolism

Soenens, A., Imperial, J. 2019. Biocontrol capabilities of the genus Serratia. Phytochemistry Reviews. DOI: 10.1007/s11101-019-09657-5


- Hydrogen recycling in root nodules improves nitrogen fixation in bean plants

Torres, A.R., Brito, B., Imperial, J., Palacios, J.M., Ciampitti, I.A., Ruiz-Argüeso, T., Hungria, M. 2020. Hydrogen-uptake genes improve symbiotic efficiency in common beans (Phaseolus vulgaris L.). Antonie van Leeuwenhoek. DOI: 10.1007/s10482-019-01381-6



- Structural Bases for the Allergenicity of Fra a 1.02 in Strawberry Fruits

Orozco-Navarrete, B., Kaczmarska, Z., Dupeux, F., Garrido-Arandia, M., Pott, D., Díaz-Perales, A., Casañal, A., Márquez, J.A., Valpuesta, V., Merchante, C. 2019. Structural Bases for the Allergenicity of Fra a 1.02 in Strawberry Fruits. Journal of Agricultural and Food Chemistry. DOI: 10.1021/acs.jafc.9b05714


- Putative new plant viruses associated with Plasmopara viticola-infected grapevine samples

Chiapello, M., Rodríguez‐Romero, J., Nerva, L., Forgia, M., Chitarra, W., Ayllón, M.A., Turina, M. 2020. Putative new plant viruses associated with Plasmopara viticola-infected grapevine samples. Annals of Applied Biology. DOI: 10.1111/aab.12563


- Genetic analysis of a white-to-red berry skin color reversion and its transcriptomic and metabolic consequences in grapevine (Vitis vinifera cv. ‘Moscatel Galego’)

Ferreira, V., Matus, J.T., Pinto-Carnide, O., Carrasco, D., Arroyo-García, R., Castro, I. 2019. Genetic analysis of a white-to-red berry skin color reversion and its transcriptomic and metabolic consequences in grapevine (Vitis vinifera cv. ‘Moscatel Galego’). BMC Genomics 20, 952. DOI: 10.1186/s12864-019-6237-5


- Metal transport in Medicago truncatula nodule rhizobia-infected cells

Abreu, I., Escudero, V., Montiel, J., Castro‐Rodríguez, R., González-Guerrero, M. 2019. Metal transport in Medicago truncatula nodule rhizobia-infected cells, in: The Model Legume Medicago Truncatula. John Wiley & Sons, Ltd, pp. 652–664. DOI: 10.1002/9781119409144.ch81


- Trends and gaps in forecasting plant virus disease risk

McLeish, M.J., Fraile, A., García‐Arenal, F. 2019. Trends and gaps in forecasting plant virus disease risk. Annals of Applied Biology 1–7. DOI: 10.1111/aab.12553


- Advances deciphering the epigenome of plants

Payá-Milans, M., Poza-Viejo, L., Martín-Uriz, P.S., Lara-Astiaso, D., Wilkinson, M.D., Crevillén, P. 2019. Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa. GigaScience 8. DOI: 10.1093/gigascience/giz147


- Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

Salazar, G., Paoli, L., Alberti, A., Huerta-Cepas, J., Ruscheweyh, H.-J., Cuenca, M., Field, C.M., Coelho, L.P., Cruaud, C., Engelen, S., Gregory, A.C., Labadie, K., Marec, C., Pelletier, E., Royo-Llonch, M., Roux, S., Sánchez, P., Uehara, H., Zayed, A.A., Zeller, G., Carmichael, M., Dimier, C., Ferland, J., Kandels, S., Picheral, M., Pisarev, S., Poulain, J., Acinas, S.G., Babin, M., Bork, P., Boss, E., Bowler, C., Cochrane, G., de Vargas, C., Follows, M., Gorsky, G., Grimsley, N., Guidi, L., Hingamp, P., Iudicone, D., Jaillon, O., Kandels-Lewis, S., Karp-Boss, L., Karsenti, E., Not, F., Ogata, H., Pesant, S., Poulton, N., Raes, J., Sardet, C., Speich, S., Stemmann, L., Sullivan, M.B., Sunagawa, S., Wincker, P., Acinas, S.G., Babin, M., Bork, P., Bowler, C., de Vargas, C., Guidi, L., Hingamp, P., Iudicone, D., Karp-Boss, L., Karsenti, E., Ogata, H., Pesant, S., Speich, S., Sullivan, M.B., Wincker, P., Sunagawa, S. 2019. Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome. Cell 179, 1068-1083.e21. DOI: 10.1016/j.cell.2019.10.014


- Gain and loss of accessory genes accelerates gene sequence divergence and promotes speciation in prokaryotes

Iranzo, J., Wolf, Y.I., Koonin, E.V., Sela, I. 2019. Gene gain and loss push prokaryotes beyond the homologous recombination barrier and accelerate genome sequence divergence. Nature Communications 10, 5376. DOI: 10.1038/s41467-019-13429-2


- Identification of a specific regulator of protein synthesis in plants

Toribio, R., Muñoz, A., Castro-Sanz, A.B., Merchante, C., Castellano, M.M. 2019. A novel eIF4E-interacting protein that forms non-canonical translation initiation complexes. Nature Plants 5, 1283–1296. DOI: 10.1038/s41477-019-0553-2


- Forest Genomics and Biotecnology

Allona, I., Kirst, M., Boerjan, W., Strauss, S., Sederof, R. (Eds.) 2019. Forest Genomics and Biotechnology. Frontiers in Plant Science. DOI: 10.3389/978-2-88963-178-0


- A step closer to nitrogen-fixing plants

Burén, S., Pratt, K., Jiang, X., Guo, Y., Jimenez-Vicente, E., Echavarri-Erasun, C., Dean, D.R., Saaem, I., Gordon, D.B., Voigt, C.A., Rubio, L.M. 2019. Biosynthesis of the nitrogenase active-site cofactor precursor NifB-co in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences. DOI: 10.1073/pnas.1904903116


- The role of CYP71A12 monooxygenase in pathogen-triggered tryptophan metabolism and Arabidopsis immunity

Pastorczyk, M., Kosaka, A., Piślewska‐Bednarek, M., López, G., Frerigmann, H., Kułak, K., Glawischnig, E., Molina, A., Takano, Y., Bednarek, P. 2019. The role of CYP71A12 monooxygenase in pathogen-triggered tryptophan metabolism and Arabidopsis immunity. New Phytologist. DOI: 10.1111/nph.16118


- Dual role of DNA methylation and gene silencing during Arabidopsis infection by tobacco rattle virus

Diezma‐Navas, L., Pérez‐González, A., Artaza, H., Alonso, L., Caro, E., Llave, C., Ruiz‐Ferrer, V. 2019. Crosstalk between epigenetic silencing and infection by tobacco rattle virus in Arabidopsis. Molecular Plant Pathology 20, 1439–1452. DOI: 10.1111/mpp.12850


- Analysis of the most relevant factors in the ability to import proteins encoded in nuclear DNA into the mitochondria in rice

Baysal, C., Pérez-González, A., Eseverri, Á., Jiang, X., Medina, V., Caro, E., Rubio, L., Christou, P., Zhu, C. 2019. Recognition motifs rather than phylogenetic origin influence the ability of targeting peptides to import nuclear-encoded recombinant proteins into rice mitochondria. Transgenic Research. DOI: 10.1007/s11248-019-00176-9


- Transcriptional Networks Underlying the Nitrate Response in Arabidopsis Roots

Alvarez, J.M., Moyano, T.C., Zhang, T., Gras, D.E., Herrera, F.J., Araus, V., O’Brien, J.A., Carrillo, L., Medina, J., Vicente-Carbajosa, J., Jiang, J., Gutiérrez, R.A. 2019. Local Changes in Chromatin Accessibility and Transcriptional Networks Underlying the Nitrate Response in Arabidopsis Roots. Molecular Plant. DOI: 10.1016/j.molp.2019.09.002


- A new species of root-nodulating bacteria in Lupinus from Tunisia

Msaddak, A., Rejili, M., Durán, D., Mars, M., Palacios, J.M., Ruiz-Argüeso, T., Rey, L., Imperial, J. 2019. Microvirga tunisiensis sp. nov., a root nodule symbiotic bacterium isolated from Lupinus micranthus and L. luteus grown in Northern Tunisia. Systematic and Applied Microbiology 126015. DOI: 10.1016/j.syapm.2019.126015


- The structure of Turnip mosaic virus, an important plant virus with a wide host range, has been solved

Cuesta, R., Yuste-Calvo, C., Gil-Cartón, D., Sánchez, F., Ponz, F., Valle, M. 2019. Structure of Turnip mosaic virus and its viral-like particles. Scientific Reports 9, 1–6. DOI: 10.1038/s41598-019-51823-4


- An Integrative Approach to Analyze Seed Germination in Brassica napus

Boter, M., Calleja-Cabrera, J., Carrera-Castaño, G., Wagner, G., Hatzig, S.V., Snowdon, R.J., Legoahec, L., Bianchetti, G., Bouchereau, A., Nesi, N., Pernas, M., Oñate-Sánchez, L. 2019. An Integrative Approach to Analyze Seed Germination in Brassica napus. Frontiers in Plant Science 10. DOI: 10.3389/fpls.2019.01342


- Chemoperception of specific amino acids controls phytopathogenicity in Pseudomonas syringae pv. tomato

Cerna-Vargas, J.P., Santamaría-Hernando, S., Matilla, M.A., Rodríguez-Herva, J.J., Daddaoua, A., Rodríguez-Palenzuela, P., Krell, T., López-Solanilla, E. 2019. Chemoperception of Specific Amino Acids Controls Phytopathogenicity in Pseudomonas syringae pv. tomato. mBio 10, e01868-19. DOI: 10.1128/mBio.01868-19


- New insights into the sensitization to non-related nsLTPs from pollen and food: new role of the allergen Ole e 7

Oeo‐Santos, C., Navas, A., Benedé, S., Ruíz‐León, B., Díaz‐Perales, A., Vogel, L., Moreno‐Aguilar, C., Jurado, A., Villalba, M., Barderas, R. 2019. New insights into the sensitization to non-related nsLTPs from pollen and food: new role of the allergen Ole e 7. Allergy. DOI: 10.1111/all.14086


- Advances and Applications in the Quest for Orthologs

Glover, N., Dessimoz, C., Ebersberger, I., Forslund, S.K., Gabaldón, T., Huerta-Cepas, J., Martin, M.-J., Muffato, M., Patricio, M., Pereira, C., da Silva, A.S., Wang, Y., Sonnhammer, E., Thomas, P.D. 2019. Advances and Applications in the Quest for Orthologs. Molecular Biology and Evolution 36, 2157–2164. DOI: 10.1093/molbev/msz150


- Viruses at the interface between wild plants and crops

García-Arenal, F., Zerbini, F.M. 2019. Life on the Edge: Geminiviruses at the Interface Between Crops and Wild Plant Hosts. Annual Review of Virology 6, 411–433. DOI: 10.1146/annurev-virology-092818-015536


- Peach Tree Pollen and Prunus persica 9 Sensitisation and Allergy in Children and Adolescents

Victorio Puche, L., Somoza, M.L., López-Sánchez, J.D., Garrido-Arandia, M., Díaz-Perales, A., Blanca, M. 2019. Peach Tree Pollen and Prunus persica 9 Sensitisation and Allergy in Children and Adolescents. International Archives of Allergy and Immunology 180, 212–220. DOI: 10.1159/000502352


- Viral nanoparticles as new tool for the hard diagnosis of autoinmune diseases

Yuste-Calvo, C., López-Santalla, M., Zurita, L., Cruz-Fernández, C.F., Sánchez, F., Garín, M.I., Ponz, F. 2019. Elongated Flexuous Plant Virus-Derived Nanoparticles Functionalized for Autoantibody Detection. Nanomaterials 9, 1438. DOI: 10.3390/nano9101438


- FAIR - more than a happy feeling!

Wilkinson, M.D., Dumontier, M., Sansone, S.-A., Santos, L.O.B. da S., Prieto, M., Batista, D., McQuilton, P., Kuhn, T., Rocca-Serra, P., Crosas, M., Schultes, E. 2019. Evaluating FAIR maturity through a scalable, automated, community-governed framework. Scientific Data 6, 1–12. DOI: 10.1038/s41597-019-0184-5


- Identified the factors that determine the seed transmission rate of plant viruses

Cobos, A., Montes, N., López-Herranz, M., Gil-Valle, M., Pagán, I. 2019. Within-host multiplication and speed of colonization as infection traits associated with plant virus vertical transmission. Journal of Virology JVI.01078-19. DOI: 10.1128/JVI.01078-19


- Climate change could promote virus dispersal through seeds

Montes, N., Pagán, I. 2019. Light Intensity Modulates the Efficiency of Virus Seed Transmission through Modifications of Plant Tolerance. Plants 8, 304. DOI: 10.3390/plants8090304


- Editorial for Special Issue “Molecular Advances in Wheat and Barley”

Martinez, M. 2019. Editorial for Special Issue “Molecular Advances in Wheat and Barley”. International Journal of Molecular Sciences 20, 3501. DOI: 10.3390/ijms20143501


- Major phytohormone controls radial expansion of plant root system

Waidmann, S., Rosquete, M.R., Schöller, M., Sarkel, E., Lindner, H., LaRue, T., Petřík, I., Dünser, K., Martopawiro, S., Sasidharan, R., Novak, O., Wabnik, K., Dinneny, J.R., Kleine-Vehn, J. 2019. Cytokinin functions as an asymmetric and anti-gravitropic signal in lateral roots. Nature Communications 10, 1–14. DOI: 10.1038/s41467-019-11483-4


- ICTV Virus Taxonomy Profile: Mymonaviridae

Jiāng (姜道宏), D., Ayllón, M.A., Marzano, S.-Y.L., ICTV Report Consortium 2019. ICTV Virus Taxonomy Profile: Mymonaviridae. Journal of General Virology. DOI: 10.1099/jgv.0.001301


- ICTV Virus Taxonomy Profile: Bromoviridae

Bujarski, J., Gallitelli, D., García-Arenal, F., Pallás, V., Palukaitis, P., Reddy, M.K., Wang, A., ICTV Report Consortium 2019. ICTV Virus Taxonomy Profile: Bromoviridae. Journal of General Virology 100, 1206–1207. DOI: 10.1099/jgv.0.001282


- Functional characterization of genes mediating cell wall metabolism and responses to plant cell wall integrity impairment

Engelsdorf, T., Kjaer, L., Gigli-Bisceglia, N., Vaahtera, L., Bauer, S., Miedes, E., Wormit, A., James, L., Chairam, I., Molina, A., Hamann, T. 2019. Functional characterization of genes mediating cell wall metabolism and responses to plant cell wall integrity impairment. BMC Plant Biology 19, 320. DOI: 10.1186/s12870-019-1934-4


- An inventory of the relic Eurasian wild grapevine populational nuclei in Huelva province (Andalusia, Spain)

Ocete, C.A., Arroyo, R., Lovicu, G., Rodríguez-Miranda, Á., Valle, J.M., Cantos, M., Garciá, J.L., Lara, M., De Canales, F.G., Llompart, J., Rodríguez, E.M., Weiland, C.M., Ocete, R. 2019. An inventory of the relic eurasian wild grapevine populational nuclei in huelva province (andalusia, Spain). Vitis - Journal of Grapevine Research 58, 53–57. DOI: 10.5073/vitis.2019.58.53-57


- Phytoglobins in the nuclei, cytoplasm and chloroplasts modulate nitric oxide signaling and interact with abscisic acid

Rubio, M.C., Calvo‐Begueria, L., Díaz‐Mendoza, M., Elhiti, M., Moore, M., Matamoros, M.A., James, E.K., Díaz, I., Pérez‐Rontomé, C., Villar, I., Sein‐Echaluce, V.C., Hebelstrup, K.H., Dietz, K.-J., Becana, M. 2019. Phytoglobins in the nuclei, cytoplasm and chloroplasts modulate nitric oxide signaling and interact with abscisic acid. The Plant Journal. DOI: 10.1111/tpj.14422


- Plant defenses against pests driven by a bidirectional promoter

Arnaiz, A., Martinez, M., Gonzalez-Melendi, P., Grbic, V., Diaz, I., Santamaria, M.E. 2019. Plant Defenses Against Pests Driven by a Bidirectional Promoter. Frontiers in Plant Science 10, 930. DOI: 10.3389/fpls.2019.00930


- Editorial: Metallic Micronutrient Homeostasis in Plants

Roschzttardtz, H., González-Guerrero, M., Gomez-Casati, D.F. 2019. Editorial: Metallic Micronutrient Homeostasis in Plants. Frontiers in Plant Science 10, 927. DOI: 10.3389/fpls.2019.00927


- Warm ambient temperature effects on flowering time in Brassica crops

del Olmo, I., Poza‐Viejo, L., Piñeiro, M., Jarillo, J.A., Crevillén, P. 2019. High ambient temperature leads to reduced FT expression and delayed flowering in Brassica rapa via a mechanism associated with H2A.Z dynamics. The Plant Journal. DOI: 10.1111/tpj.14446


- LHY2 Integrates Night-Length Information to Determine Timing of Poplar Photoperiodic Growth

Ramos-Sánchez, J.M., Triozzi, P.M., Alique, D., Geng, F., Gao, M., Jaeger, K.E., Wigge, P.A., Allona, I., Perales, M. 2019. LHY2 Integrates Night-Length Information to Determine Timing of Poplar Photoperiodic Growth. Current Biology. DOI: 10.1016/j.cub.2019.06.003


- New multidrug transporter of Pseudomonas syringae pv. tomato involved in resistance to plant antimicrobials

Santamaría-Hernando, S., Senovilla, M., González-Mula, A., Martínez-García, P.M., Nebreda, S., Rodríguez-Palenzuela, P., López-Solanilla, E., Rodríguez-Herva, J.J. 2019. The Pseudomonas syringae pv. tomato DC3000 PSPTO_0820 multidrug transporter is involved in resistance to plant antimicrobials and bacterial survival during tomato plant infection. PLOS ONE 14, e0218815. DOI: 10.1371/journal.pone.0218815


- Plant Responses to Phytophagous Mites/Thrips and Search for Resistance

Sperotto, R.A., Grbic, V., Pappas, M.L., Leiss, K.A., Kant, M.R., Wilson, C.R., Santamaria, M.E., Gao, Y. 2019. Editorial: Plant Responses to Phytophagous Mites/Thrips and Search for Resistance. Frontiers in Plant Science 10, 866. DOI: 10.3389/fpls.2019.00866


- To increase crop production with fewer fertilizers: The relevance of the phosphate

Silva‐Navas, J., Conesa, C.M., Saez, A., Navarro‐Neila, S., Garcia‐Mina, J.M., Zamarreño, A.M., Baigorri, R., Swarup, R., del Pozo, J.C. 2019. Role of cis-zeatin in root responses to phosphate starvation. New Phytologist. DOI: 10.1111/nph.16020


- Effect of pre- and post-weaning dietary supplementation with arginine and glutamine on rabbit performance and intestinal health

Delgado, R., Abad-Guamán, R., Nicodemus, N., Diaz-Perales, A., García, J., Carabaño, R., Menoyo, D. 2019. Effect of pre- and post-weaning dietary supplementation with arginine and glutamine on rabbit performance and intestinal health. BMC Veterinary Research 15, 199. DOI: 10.1186/s12917-019-1945-2


- Defense at the end of the channel

Rustgi, S., Springer, A., Kang, C., von Wettstein, D., Reinbothe, C., Reinbothe, S., Pollmann, S. 2019. ALLENE OXIDE SYNTHASE and HYDROPEROXIDE LYASE, Two Non-Canonical Cytochrome P450s in Arabidopsis thaliana and Their Different Roles in Plant Defense. International Journal of Molecular Sciences 20, 3064. DOI: 10.3390/ijms20123064


- Cucumber mosaic virus as a potential selective pressure on Arabidopsis thaliana populations

Montes, N., Alonso-Blanco, C., García-Arenal, F. 2019. Cucumber mosaic virus infection as a potential selective pressure on Arabidopsis thaliana populations. PLOS Pathogens 15, e1007810. DOI: 10.1371/journal.ppat.1007810


- NG-meta-profiler: A bioinformatics tool for fast processing and functional profiling of metagenomic samples

Coelho, L.P., Alves, R., Monteiro, P., Huerta-Cepas, J., Freitas, A.T., Bork, P. 2019. NG-meta-profiler: fast processing of metagenomes using NGLess, a domain-specific language. Microbiome 7, 84. DOI: 10.1186/s40168-019-0684-8


- Synthetic biology techniques to get better and more reproducible transgenic plants

Pérez-González, A., Caro, E. 2019. Benefits of using genomic insulators flanking transgenes to increase expression and avoid positional effects. Scientific Reports 9, 8474. DOI: 10.1038/s41598-019-44836-6


- Cadmium induces ROS-dependent pexophagy in Arabidopsis leaves

Calero‐Muñoz, N., Exposito‐Rodriguez, M., Collado‐Arenal, A.M., Rodríguez-Serrano, M., Laureano‐Marín, A.M., Santamaría, M.E., Gotor, C., Díaz, I., Mullineaux, P.M., Romero‐Puertas, M.C., Olmedilla, A., Sandalio, L.M. 2019. Cadmium induces ROS-dependent pexophagy in Arabidopsis leaves. Plant, Cell & Environment. DOI: 10.1111/pce.13597


- Jasmonate and auxin perception: how plants keep F-boxes in check

Williams, C., Fernández-Calvo, P., Colinas, M., Pauwels, L., Goossens, A. 2019. Jasmonate and auxin perception: how plants keep F-boxes in check. Journal of Experimental Botany erz272. DOI: 10.1093/jxb/erz272


- Taxonomy of the order Mononegavirales: update 2019

Amarasinghe, G.K., Ayllón, M.A., Bào, Y., Basler, C.F., Bavari, S., Blasdell, K.R., Briese, T., Brown, P.A., Bukreyev, A., Balkema-Buschmann, A., Buchholz, U.J., Chabi-Jesus, C., Chandran, K., Chiapponi, C., Crozier, I., de Swart, R.L., Dietzgen, R.G., Dolnik, O., Drexler, J.F., Dürrwald, R., Dundon, W.G., Duprex, W.P., Dye, J.M., Easton, A.J., Fooks, A.R., Formenty, P.B.H., Fouchier, R.A.M., Freitas-Astúa, J., Griffiths, A., Hewson, R., Horie, M., Hyndman, T.H., Jiāng, D., Kitajima, E.W., Kobinger, G.P., Kondō, H., Kurath, G., Kuzmin, I.V., Lamb, R.A., Lavazza, A., Lee, B., Lelli, D., Leroy, E.M., Lǐ, J., Maes, P., Marzano, S.-Y.L., Moreno, A., Mühlberger, E., Netesov, S.V., Nowotny, N., Nylund, A., Økland, A.L., Palacios, G., Pályi, B., Pawęska, J.T., Payne, S.L., Prosperi, A., Ramos-González, P.L., Rima, B.K., Rota, P., Rubbenstroth, D., Shī, M., Simmonds, P., Smither, S.J., Sozzi, E., Spann, K., Stenglein, M.D., Stone, D.M., Takada, A., Tesh, R.B., Tomonaga, K., Tordo, N., Towner, J.S., van den Hoogen, B., Vasilakis, N., Wahl, V., Walker, P.J., Wang, L.-F., Whitfield, A.E., Williams, J.V., Zerbini, F.M., Zhāng, T., Zhang, Y.-Z., Kuhn, J.H. 2019. Taxonomy of the order Mononegavirales: update 2019. Archives of Virology. DOI: 10.1007/s00705-019-04247-4


- Plant proteases: from key enzymes in germination to allies for fighting gluten-related disorders

Martinez, M., Gómez-Cabellos, S., Giménez, M.J., Barro, F., Diaz, I., Diaz-Mendoza, M. 2019. Plant Proteases: From Key Enzymes in Germination to Allies for Fighting Human Gluten-Related Disorders. Frontiers in Plant Science 10, 721. DOI: 10.3389/fpls.2019.00721


- More and better genomic information just by changing the polyA

Telléz‐Robledo, B., Manzano, C., Saez, A., Navarro‐Neila, S., Silva‐Navas, J., de Lorenzo, L., González‐García, M.-P., Toribio, R., Hunt, A.G., Baigorri, R., Casimiro, I., Brady, S.M., Castellano, M.M., Del Pozo, J.C. 2019. The polyadenylation factor FIP1 is important for plant development and root responses to abiotic stresses. The Plant Journal. DOI: 10.1111/tpj.14416


- Proteases involved in wheat and barley grain germination

Diaz-Mendoza, M., Diaz, I., Martinez, M. 2019. Insights on the Proteases Involved in Barley and Wheat Grain Germination. International Journal of Molecular Sciences 20, 2087. DOI: 10.3390/ijms20092087


- The mold allergen Alt a 1 is related to asthma vía its interaction with the lung receptor SLC22A17

Garrido‐Arandia, M., Tome‐Amat, J., Pazos‐Castro, D., Esteban, V., Escribese, M.M., Hernández‐Ramírez, G., Yuste, A.M., Barber, D., Pacios, L.F., Díaz‐Perales, A. 2019. Interaction of Alt a 1 with SLC22A17 in the airway mucosa. Allergy. DOI: 10.1111/all.13877


- Anionic phospholipids induce conformational changes in phosphoenolpyruvate caboxylase to increae sensitivity to cathepsin protease

Gandullo, J., Monreal, J.-A., Álvarez, R., Díaz, I., García-Mauriño, S., Echevarría, C. 2019. Anionic Phospholipids Induce Conformational Changes in Phosphoenolpyruvate Carboxylase to Increase Sensitivity to Cathepsin Proteases. Frontiers in Plant Science 10. DOI: 10.3389/fpls.2019.00582


- The endophytic fungus Serendipita indica helps to reduce Na+ accumulation in plants exposed to salinity

Lanza, M., Haro, R., Conchillo, L.B., Benito, B. 2019. The endophyte Serendipita indica reduces the sodium content of Arabidopsis plants exposed to salt stress: fungal ENA ATPases are expressed and regulated at high pH and during plant co-cultivation in salinity. Environmental Microbiology. DOI: 10.1111/1462-2920.14619


- The endophytic fungus Serendipita indica helps to reduce Na+ accumulation in plants exposed to salinity

Lanza, M., Haro, R., Conchillo, L.B., Benito, B. 2019. The endophyte Serendipita indica reduces the sodium content of Arabidopsis plants exposed to salt stress: fungal ENA ATPases are expressed and regulated at high pH and during plant co-cultivation in salinity. Environmental Microbiology. DOI: 10.1111/1462-2920.14619


- Identification of a new allergen in pediatric allergy

Somoza, M.L., Garrido‐Arandia, M., Victorio, L., López‐Sánchez, J.D., Blanca‐López, N., Haroun‐Diaz, E., Sahagún, A.R., Díaz‐Perales, A., Canto, G., Blanca, M. 2019. Peach tree pollen and Pru p 9 may induce rhinoconjunctivitis and asthma in children. Pediatric Allergy and Immunology. DOI: 10.1111/pai.13067


- The type VI secretion system of Rhizobium etli Mim1 has a positive effect in symbiosis with beans

Salinero-Lanzarote, A., Pacheco-Moreno, A., Domingo-Serrano, L., Durán, D., Ormeño-Orrillo, E., Martínez-Romero, E., Albareda, M., Palacios, J.M., Rey, L. 2019. The type VI secretion system of Rhizobium etli Mim1 has a positive effect in symbiosis. FEMS Microbiology Ecology fiz054. DOI: 10.1093/femsec/fiz054


- Engineering tree seasonal cycles of growth through chromatin modification

Conde, D., Perales, M., Sreedasyam, A., Tuskan, G.A., Lloret, A., Badenes, M.L., González-Melendi, P., Ríos, G., Allona, I. 2019. Engineering Tree Seasonal Cycles of Growth Through Chromatin Modification. Frontiers in Plant Science 10. DOI: 10.3389/fpls.2019.00412


- Structure-Based Multifunctionalization of Viral Nanoparticles

Yuste-Calvo, C., González-Gamboa, I., Pacios, L.F., Sánchez, F., Ponz, F. 2019. Structure-Based Multifunctionalization of Flexuous Elongated Viral Nanoparticles. ACS Omega 4, 5019–5028. DOI: 10.1021/acsomega.8b02760


- Automated identification of microbiome states

García-Jiménez, B., Wilkinson, M.D. 2019. Robust and automatic definition of microbiome states. PeerJ 7, e6657. DOI: 10.7717/peerj.6657


- How does a lipid molecule move inside an allergen protein? How is the lipid released from the protein?

Cuevas-Zuviría, B., Garrido-Arandia, M., Díaz-Perales, A., Pacios, L.F. 2019. Energy Landscapes of Ligand Motion Inside the Tunnel-Like Cavity of Lipid Transfer Proteins: The Case of the Pru p 3 Allergen. International Journal of Molecular Sciences 20, 1432. DOI: 10.3390/ijms20061432


- Importance of the molybdenum storage protein for future biotechnological applications

Navarro-Rodríguez, M., Buesa, J.M., Rubio, L.M. 2019. Genetic and biochemical analysis of the Azotobacter vinelandii molybdenum storage protein. Frontiers in Microbiology 10. DOI: 10.3389/fmicb.2019.00579


- Microbial abundance, activity and population genomic profiling with mOTUs2

Milanese, A., Mende R, D., Paoli, L., Salazar, G., Ruscheweyh, H.-J., Cuenca, M., Hingamp, P., Alves, R., Costea, P.I., Coelho, L.P., Schmidt, T.S.B., Almeida, A., Mitchell, A.L., Finn, R.D., Huerta-Cepas, J., Bork, P., Zeller, G., Sunagawa, S. 2019. Microbial abundance, activity and population genomic profiling with mOTUs2. Nature Communications 10, 1014. DOI: 10.1038/s41467-019-08844-4


- In vitro approaches used in the study of food sensitization

Lozano-Ojalvo, D., Benedé, S., Antunes, C.M., Bavaro, S.L., Bouchaud, G., Costa, A., Denery-Papini, S., Díaz-Perales, A., Garrido-Arandia, M., Gavrovic-Jankulovic, M., Hayen, S., Martínez-Blanco, M., Molina, E., Monaci, L., Pieters, R.H.H., Villemin, C., Wichers, H.J., Wróblewska, B., Willemsen, L.E.M., Roggen, E.L., van Bilsen, J.H.M. 2019. Applying the adverse outcome pathway (AOP) for food sensitization to support in vitro testing strategies. Trends in Food Science & Technology 85, 307–319. DOI: 10.1016/j.tifs.2019.01.014


- TIR-Lectin two-domain protein confers defence properties against spider mite attack

Santamaria, M.E., Martinez, M., Arnaiz, A., Rioja, C., Burow, M., Grbic, V., Diaz, I. 2019. An Arabidopsis TIR-lectin two-domain protein confers defence properties against Tetranychus urticae. Plant Physiology pp.00951.2018. DOI: 10.1104/pp.18.00951


- Channelling of the metabolic flux through the Vick-Zimmerman pathway contributes to fine-tune plant defence

Pollmann, S., Springer, A., Rustgi, S., Wettstein, D. von, Kang, C., Reinbothe, C., Reinbothe, S. 2019. Substrate channeling in oxylipin biosynthesis through a protein complex in the plastid envelope of Arabidopsis thaliana. Journal of Experimental Botany erz015. DOI: 10.1093/jxb/erz015


- Unravelled new mechanistic insights into the role of histone acetylation in controlling the expression of floral repressor FLC in Arabidopsis

Crevillén, P., Gómez‐Zambrano, Á., López, J.A., Vázquez, J., Piñeiro, M., Jarillo, J.A. 2019. Arabidopsis YAF9 histone readers modulate flowering time through NuA4-complex-dependent H4 and H2A.Z histone acetylation at FLC chromatin. New Phytologist. DOI: 10.1111/nph.15737


- The relevance of being out of order: requirement of Intrinsically Disordered Regions for metalloenzyme biosynthesis

Albareda, M., Pacios, L.F., Palacios, J.M. 2019. Computational analyses, molecular dynamics, and mutagenesis studies of unprocessed form of [NiFe] hydrogenase reveal the role of disorder for efficient enzyme maturation. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1860, 325–340. DOI: 10.1016/j.bbabio.2019.01.001


- STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets

Szklarczyk, D., Gable, A.L., Lyon, D., Junge, A., Wyder, S., Huerta-Cepas, J., Simonovic, M., Doncheva, N.T., Morris, J.H., Bork, P., Jensen, L.J., von Mering, C. 2018. STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets. Nucleic Acids Research 47, D607–D613. DOI: 10.1093/nar/gky1131


- Antibiotics-induced monodominance of a novel gut bacterial order

Hildebrand, F., Moitinho-Silva, L., Blasche, S., Jahn, M.T.T., Gossmann, T.I., Huerta-Cepas, J., Hercog, R., Luetge, M., Bahram, M., Pryszlak, A., Alves, R.J., Waszak, S.M., Zhu, A., Ye, L., Costea, P.I., Aalvink, S., Belzer, C., Forslund, S.K., Sunagawa, S., Hentschel, U., Merten, C., Patil, K.R., Benes, V., Bork, P. 2019. Antibiotics-induced monodominance of a novel gut bacterial order. Gut gutjnl-2018-317715. DOI: 10.1136/gutjnl-2018-317715


- Iron distribution in dicot embryos

Ibeas, M.A., Grant-Grant, S., Coronas, M.F., Vargas-Pérez, J.I., Navarro, N., Abreu, I., Castillo-Michel, H., Avalos-Cembrano, N., Paez Valencia, J., Perez, F., González-Guerrero, M., Roschzttardtz, H. 2019. The Diverse Iron Distribution in Eudicotyledoneae Seeds: From Arabidopsis to Quinoa. Frontiers in Plant Science 9, 1985. DOI: 10.3389/fpls.2018.01985


- SmE1, a new component of the spliceosome machinery, key for the adaptation of plants to their environment

Huertas, R., Catalá, R., Jimenez-Gomez, J., Castellano, M.M., Crevillén, P., Piñeiro, M., Jarillo, J.A., Salinas, J. 2019. Arabidopsis SME1 regulates plant development and response to abiotic stress by determining spliceosome activity specificity. The Plant Cell tpc.00689.2018. DOI: 10.1105/tpc.18.00689


- Molecular characterization of berry color locus on the Portuguese Fernão Pires and Verdelho red-berried bud sports

Ferreira, V., Castro, I., Carrasco, D., Pinto-Carnide, O., Arroyo-García, R. 2019. Molecular characterization of berry color locus on the portuguese cv. ‘Fernão Pires’ and cv. ‘Verdelho’ and their red-berried somatic variant cultivars. Ciência e Técnica Vitivinícola 33, 184–190. DOI: 10.1051/ctv/20183302184


- Evolution of plant-virus interactions: host range and virus emergence

McLeish, M.J., Fraile, A., García-Arenal, F. 2019. Evolution of plant–virus interactions: host range and virus emergence. Current Opinion in Virology, Emerging viruses: intraspecies transmission • Viral Immunology 34, 50–55. DOI: 10.1016/j.coviro.2018.12.003


- The seed embryo sends signals to the encapsulating endosperm to promote cell expansion events critical for germination

Sánchez-Montesino, R.; Bouza-Morcillo, L.; Marquez, J.; Ghita, M.; Duran-Nebreda, S.; Gómez, L.; Holdsworth, M.J.; Bassel, G.; Oñate-Sánchez, L. 2019. "A regulatory module controlling GA-mediated endosperm cell expansion is critical for seed germination in Arabidopsis". Molecular Plant. DOI: 10.1016/j.molp.2018.10.009.



- IAA and JA gradients mutually control gravitropic growth in pine

Salazar, R., Pollmann, S., Morales-Quintana, L., Herrera, R., Caparrós-Ruiz, D., Ramos, P. 2018. In seedlings of Pinus radiata, jasmonic acid and auxin are differentially distributed on opposite sides of tilted stems affecting lignin monomer biosynthesis and composition. Plant Physiology and Biochemistry 135, 215–223. DOI: 10.1016/j.plaphy.2018.12.008


- Trees to fight pollution

Gomez, L., Contreras, A., Bolonio, D., Quintana, J., Oñate-Sanchez, L., Merino, I. 2019. Phytoremediation with trees, in: Advances in Botanical Research. Academic Press. DOI: 10.1016/bs.abr.2018.11.010


- Environmentally sensitive molecular switches drive poplar phenology

Maurya, J.P., Triozzi, P.M., Bhalerao, R.P., Perales, M. 2018. Environmentally Sensitive Molecular Switches Drive Poplar Phenology. Frontiers in Plant Science 9. DOI: 10.3389/fpls.2018.01873


- Polyamine and cell growth inhibition: blocking protein ubiquitylation and depletion of intracellular amino acids pool

Sayas, E., Pérez‐Benavente, B., Manzano, C., Farràs, R., Alejandro, S., del Pozo, J.C., Ferrando, A., Serrano, R. 2018. Polyamines interfere with protein ubiquitylation and cause depletion of intracellular amino acids: a possible mechanism for cell growth inhibition. FEBS Letters. DOI: 10.1002/1873-3468.13299


- Co-infection organises non-random virus and host interactions

McLeish, M., Sacristán, S., Fraile, A., Garcia-Arenal, F. 2018. Co-infection organises epidemiological networks of viruses and hosts and reveals hubs of transmission. Phytopathology. DOI: 10.1094/PHYTO-08-18-0293-R


- Differential response of silencing HvIcy2 barley plants under biotic and abiotic stresses

Velasco-Arroyo, B., Martinez, M., Diaz, I., Diaz-Mendoza, M. 2018. Differential response of silencing HvIcy2 barley plants against Magnaporthe oryzae infection and light deprivation. BMC Plant Biology 18, 337. DOI: 10.1186/s12870-018-1560-6


- Limitations to host-range expansion in plant viruses

Bera, S., Fraile, A., García-Arenal, F. 2018. Analysis of Fitness Trade-Offs in the Host Range Expansion of an RNA Virus, Tobacco Mild Green Mosaic Virus. Journal of Virology 92, e01268-18. DOI: 10.1128/JVI.01268-18


- Repression of some cysteine-proteases makes barley leaves more resistant to pest and pathogens

Gomez-Sanchez, A., Gonzalez-Melendi, P., Santamaria, M.E., Arbona, V., Lopez-Gonzalvez, A., Garcia, A., Hensel, G., Kumlehn, J., Martinez, M., Diaz, I. 2018. Knock-downs for drought-induced cysteine-protease genes alter barley leaf structure and the response to abiotic and biotic stresses. Journal of Experimental Botany ery410. DOI: 10.1093/jxb/ery410


- Transcriptional profiling of dendritic cells in a mouse model of food-antigen induced anaphylaxis reveals the upregulation of multiple immune-related pathways

Rodriguez, M.J., Palomares, F., Bogas, G., Torres, M.J., Diaz‐Perales, A., Rojo, J., Plaza‐Seron, M. del C., Rodriguez‐Nogales, A., Orengo, C., Mayorga, C., Perkins, J.R. 2018. Transcriptional profiling of dendritic cells in a mouse model of food-antigen induced anaphylaxis reveals the upregulation of multiple immune-related pathways. Molecular Nutrition & Food Research 1800759. DOI: 10.1002/mnfr.201800759


- Epigenetics in forest trees - Implications in a context of climate change

Sow, M.D., Allona, I., Ambroise, C., Conde, D., Fichot, R., Gribkova, S., Jorge, V., Le-Provost, G., Pâques, L., Plomion, C., Salse, J., Sanchez, L., Segura, V., Tost, J., Maury, S. 2018. Epigenetics in Forest Trees: State of the Art and Potential Implications for Breeding and Management in a Context of Climate Change. Advances in Botanical Research. DOI: 10.1016/bs.abr.2018.09.003


- The first formal data publication from CBGP

Marconi, M., Sesma, A., Rodríguez-Romero, J.L., Rosano González, M.L., Wilkinson, M.D. 2018. Genome-wide polyadenylation site mapping datasets in the rice blast fungus Magnaporthe oryzae. Scientific Data 5, 180271. DOI: 10.1038/sdata.2018.271


- TransFlow: New tool to assemble de novo transcriptomes in non-model organisms

Seoane, P.; Espigares, M.; Carmona, R.; Polonio, Á.; Quintana, J.; Cretazzo, E.; Bota, J.; Pérez-García, A.; Dios Alché, J. de; Gómez, L.; Claros, M.G. 2018. "TransFlow: a modular framework for assembling and assessing accurate de novo transcriptomes in non-model organisms". BMC Bioinformatics 19, 416. DOI: 10.1186/s12859-018-2384-y


- A new plant immunity regulator that controls the production of reactive oxygen species during disease resistance responses

Escudero, V., Torres, M.A., Delgado, M., Sopeña-Torres, S., Swami, S., Morales, J., Muñoz-Barrios, A., Mélida, H., Jones, A.M., Jordá, L., Molina, A., 2018. "Mitogen-activated protein kinase phosphatase 1 (MKP1) negatively regulates the production of Reactive Oxygen Species during Arabidopsis immune responses". Molecular Plant-Microbe Interactions. DOI: 10.1094/MPMI-08-18-0217-FI.


- Are methods of allergenic risk assessment suitable for application to novel foods?

Mazzucchelli, G; Holzhauser, T; Cirkovic Velickovic, T; Diaz-Perales, A; Molina, E; Roncada, P; Rodrigues, P; Verhoeckx, K; Hoffmann-Sommergruber, K. 2018. "Current (food) allergenic risk assessment: Is it fit for novel foods? Status Quo and identification of gaps". Molecular Nutrition and Food Research. DOI: 10.1002/mnfr.201700278".


- The defensive roles of rice diterpenoids

Lu, X; Zhang, J; Brown, B; Li, R; Rodríguez-Romero, J; Berasategui, A; Liu, B; Xu, M; Luo, D; Pan, Z; Baerson, SR; Gershenzon, J; Li, Z; Sesma, A; Yang, B; Peters, RJ. 2018. "Inferring roles in defense from metabolic allocation of rice diterpenoids". Plant Cell. DOI: 10.1105/tpc.18.00205".


- Molecular characterization of grape varieties preserved in a Spanish germplasm bank

Jiménez-Cantizano, A; García De Luján, A; Arroyo-García, R. 2018. "Molecular characterization of table grape varieties preserved in the Rancho de la Merced Grapevine Germplasm Bank (Spain)". Vitis - Journal of Grapevine Research. DOI: 10.5073/vitis.2018.57.93-101".


- Berry color variation in grapevine as a source of diversity

Ferreira, V; Pinto-Carnide, O; Arroyo-García, R; Castro, I. 2018. "Berry color variation in grapevine as a source of diversity". Plant Physiology and Biochemistry. DOI: 10.1016/j.plaphy.2018.08.021".


- Molecular characterization of grape berry skin color reversion

Ferreira, V; Castro, I; Carrasco, D; Pinto-Carnide, O; Arroyo-García, R. 2018. "Molecular characterization of berry skin color reversion on grape somatic variants". Journal of Berry Research. DOI: 10.3233/JBR-170289".


- Connection between reticulum stress and transcription factors mechanisms of action

Arraño-Salinas, P; Domínguez-Figueroa, J; Herrera-Vásquez, A; Zavala, D; Medina, J; Vicente-Carbajosa, J; Meneses, C; Canessa, P; Moreno, AA; Blanco-Herrera, F. 2018. "WRKY7, -11 and -17 transcription factors are modulators of the bZIP28 branch of the unfolded protein response during PAMP-triggered immunity in Arabidopsis thaliana". Plant Science. DOI: 10.1016/j.plantsci.2018.09.019".


- Tobamoviruses and virus evolution

Fraile, A; García-Arenal, F. 2018. "Tobamoviruses as models for the study of virus evolution", Advances in Virus Research. Academic Press. DOI: 10.1016/bs.aivir.2018.06.006".


- Different plant immunities share common regulatory mechanisms

Kadota, Y; Liebrand, TWH; Goto, Y; Sklenar, J; Derbyshire, P; Menke, FLH; Torres, M-A; Molina, A; Zipfel, C; Coaker, G; Shirasu, K. "Quantitative phosphoproteomic analysis reveals common regulatory mechanisms between effector- and PAMP-triggered immunity in plants". New Phytologist. DOI: 10.1111/nph.15523".


- A non-symbiont rhizobium in Spanish drylands

Soenens, A; Gomila, M; Imperial, J. 2018. "Neorhizobium tomejilense sp. nov., first non-symbiotic Neorhizobium species isolated from a dryland agricultural soil in southern Spain". Systematic and Applied Microbiology. DOI: 10.1016/j.syapm.2018.09.001".


- Next-generation sequencing for the characterization of plant genetic modifications

Pérez-González, A; Eseverri, Á; Caro, E. 2018. "Characterization of Plant Genetic Modifications Using Next-Generation Sequencing", p. 249-259. In S. Singh (ed.), Synthetic Biology: Omics Tools and Their Applications. Springer Singapore, Singapore. DOI: 10.1007/978-981-10-8693-9_13".


- A new saffron virus

Parizad, S; Dizadji, A; Koohi Habibi, M; Winter, S; Kalantari, S; Movi, S; García-Arenal, F; Ayllón, MA. 2018. "Description and genetic variation of a distinct species of Potyvirus infecting saffron (Crocus sativus L.) plants in major production regions in Iran". Annals of Applied Biology 2018 v.173 no.3 pp. 233-242. DOI: 10.1111/aab.12456".


- Pseudomonas syringae pv. tomato exploits light signals to optimize virulence and colonization of leaves

Santamaría-Hernando, S; Rodríguez-Herva, JJ; Martínez-García, PM; Río-Álvarez, I; González-Melendi, P; Zamorano, J; Tapia, C; Rodríguez-Palenzuela, P; López-Solanilla, E. 2018. "Pseudomonas syringae pv. tomato exploits light signals to optimize virulence and colonization of leaves". Environmental Microbiology. DOI: 10.1111/1462-2920.14331".


- MDPbiome: engineering microbiomes

García-Jiménez, B; de la Rosa, T; Wilkinson, MD. 2018. "MDPbiome: microbiome engineering through prescriptive perturbations". Bioinformatics. DOI: 10.1093/bioinformatics/bty562".


- A lipid transfer protein as a wheat allergen

Safi, H; Wangorsch, A; Lidholm, J; Brini, F; Spiric, J; Rihs, H-P; Vieths, S; Armentia, A; Farioli, L; Diaz-Perales, A; Pastorello, EA; Scheurer, S. "Identification and molecular characterization of allergenic nsLTP from durum wheat (Triticum turgidum)". Clinical & Experimental Allergy. DOI: 10.1111/cea.13271".


- A comment by members of the CBGP group ‘Biochemistry of nitrogen fixation’ about recent developments in the field using giant genes for nitrogenase engineering

Burén, S; López-Torrejón, G; Rubio, LM. 2018. "Extreme bioengineering to meet the nitrogen challenge". Proceedings of the National Academy of Sciences of the United States of America. DOI: 10.1073/pnas.1812247115".


- Arabidopsis Kunitz Trypsin Inhibitors in Defence Against Spider Mites

Arnaiz, A; Talavera-Mateo, L; Gonzalez-Melendi, P; Martinez, M; Diaz, I; Santamaria, ME. 2018. "Arabidopsis Kunitz trypsin inhibitors in defense against spider mites". Frontiers in Plant Science. DOI: 10.3389/fpls.2018.00986".


- Boron-deficiency highly-tolerant rapeseed cultivars

Pommerrenig, B; Junker, A; Abreu, I; Bieber, A; Fuge, J; Willner, E; Bienert, MD; Altmann, T; Bienert, GP. 2018. "Identification of rapeseed (Brassica napus) cultivars with a high tolerance to boron-deficient conditions". Frontiers in Plant Science. DOI: 10.3389/fpls.2018.01142".


- Modulation of auxin levels in pollen grains affects stamen development and anther dehiscence in Arabidopsis

Salinas-Grenet, H; Herrera-Vásquez, A; Parra, S; Cortez, A; Gutiérrez, L; Pollmann, S; León, G; Blanco-Herrera, F. 2018. "Modulation of auxin levels in pollen grains affects stamen development and anther dehiscence in Arabidopsis". International Journal of Molecular Sciences. DOI: 10.3390/ijms19092480".


- Advances in Plant Metabolomics

Pérez‐Alonso, M; Carrasco‐Loba, V; Pollmann, S. 2018. "Advances in Plant Metabolomics". In J. A. Roberts (ed.), Annual Plant Reviews online. DOI: 10.1002/9781119312994.apr0660".


- A phylogenetic view of the diversity, evolution, and epidemiology of plant viruses

Pagán, I. 2018. "The diversity, evolution and epidemiology of plant viruses: A phylogenetic view". Infection, Genetics and Evolution. DOI: 10.1016/j.meegid.2018.07.033".


- Identification of two auxin-regulated potassium transporters involved in seed maturation

Tenorio-Berrío, R; Pérez-Alonso, M-M; Vicente-Carbajosa, J; Martín-Torres, L; Dreyer, I; Pollmann, S. 2018. "Identification of two auxin-regulated potassium transporters involved in seed maturation". International Journal of Molecular Sciences. DOI: 10.3390/ijms19072132".


- A peptide receptor plays a role in the relation of a normal morphogenesis with cell wall integrity

Gonneau, M; Desprez, T; Martin, M; Doblas, VG; Bacete, L; Miart, F; Sormani, R; Hématy, K; Renou, J; Landrein, B; Murphy, E; Van De Cotte, B; Vernhettes, S; De Smet, I; Höfte, H. 2018. "Receptor Kinase THESEUS1 Is a Rapid Alkalinization Factor 34 Receptor in Arabidopsis". Current Biology. DOI: 10.1016/j.cub.2018.05.075".


- Virulence and signalling mechanisms are regulated by the length of the 3' ends of mRNAs in the rice blast fungus

Rodríguez-Romero, J; Marconi, M; Ortega-Campayo, V; Demuez, M; Wilkinson, MD; Sesma, A. 2018. "Virulence- and signaling-associated genes display a preference for long 3′UTRs during rice infection and metabolic stress in the rice blast fungus". New Phytologist. DOI: 10.1111/nph.15405".


- Surprising discovery of a role of terminators in the induction of transgene silencing

Pérez-González, A; Caro, E. 2018. "Effect of transcription terminator usage on the establishment of transgene transcriptional gene silencing". BMC Research Notes. DOI: 10.1186/s13104-018-3649-2".


- New perspectives about photoperiodic regulation of shoot apical growth in poplar

Triozzi, PM; Ramos-Sánchez, JM; Hernández-Verdeja, T; Moreno-Cortés, A; Allona, I; Perales, M. 2018. "Photoperiodic regulation of shoot apical growth in poplar". Frontiers in Plant Science. DOI: 10.3389/fpls.2018.01030".


- Genetic diversity analysis of cultivated and wild grapevine (Vitis vinifera L.) accessions around the Mediterranean basin and Central Asia

Riaz, S; De Lorenzis, G; Velasco, D; Koehmstedt, A; Maghradze, D; Bobokashvili, Z; Musayev, M; Zdunic, G; Laucou, V; Andrew Walker, M; Failla, O; Preece, JE; Aradhya, M; Arroyo-Garcia, R. 2018. "Genetic diversity analysis of cultivated and wild grapevine (Vitis vinifera L.) accessions around the Mediterranean basin and Central Asia". BMC Plant Biology. DOI: 10.1186/s12870-018-1351-0".


- A component of the transcription machinery revealed as a new player in tomato pollen and anther development

Pérez-Martín, F; Yuste-Lisbona, FJ; Pineda, B; García-Sogo, B; del Olmo, I; Alché, JdD; Egea, I; Flores, FB; Piñeiro, M; Jarillo, JA; Angosto, T; Capel, J; Moreno, V; Lozano, R. 2018. "Developmental role of the tomato Mediator complex subunit MED18 in pollen ontogeny". Plant Journal. DOI: 10.1111/tpj.14031".


- Auxin methylation is required for differential growth in Arabidopsis

Abbas, M; Hernández-García, J; Pollmann, S; Samodelov, SL; Kolb, M; Friml, J; Hammes, UZ; Zurbriggen, MD; Blázquez, MA; Alabadí, D. 2018. "Auxin methylation is required for differential growth in Arabidopsis". Proceedings of the National Academy of Sciences. DOI: 10.1073/pnas.1806565115".


- Zinc is required for legume nodule development

León-Mediavilla, J; Senovilla, M; Montiel, J; Gil-Díez, P; Saez, Á; Kryvoruchko, IS; Reguera, M; Udvardi, MK; Imperial, J; González-Guerrero, M. 2018. "MtMTP2-facilitated zinc transport into intracellular compartments is essential for nodule development in Medicago truncatula". Frontiers in Plant Science. DOI: 10.3389/fpls.2018.00990".


- A complex network of ROS regulation is involved in the defence response of Arabidopsis against the two-spotted spider mite

Santamaría, ME; Arnaiz, A; Velasco-Arroyo, B; Grbic, V; Diaz, I; Martinez, M. 2018. "Arabidopsis response to the spider mite Tetranychus urticae depends on the regulation of reactive oxygen species homeostasis". Scientific Reports. DOI: 10.1038/s41598-018-27904-1".


- Metrics for quantitative evaluation of FAIR Data

Wilkinson, MD; Sansone, S-A; Schultes, E; Doorn, P; Bonino da Silva Santos, LO; Dumontier, M. 2018. "A design framework and exemplar metrics for FAIRness". Scientific Data. DOI: 10.1038/sdata.2018.118".


- MtMOT1.2 is the transporter responsible for molybdate delivery to Medicago truncatula nodules

Gil-Díez, P; Tejada-Jiménez, M; León-Mediavilla, J; Wen, J; Mysore, KS; Imperial, J; González-Guerrero, M. "MtMOT1.2 is responsible for molybdate supply to Medicago truncatula nodules". Plant, Cell & Environment. DOI: 10.1111/pce.13388".


- Two-hybrid systems are revisited

Two Hybrid Systems: Methods and protocols (2018) ISBN 978-1-4939-7871-7. Methods in Molecular Biology Series. Oñate-Sánchez, Luis (Ed.). DOI: 10.1007/978-1-4939-7871-7_9


- Screening arrayed libraries with DNA and protein baits to identify interacting proteins

Sánchez-Montesino, R; Oñate-Sánchez, L. 2018. "Screening arrayed libraries with DNA and protein baits to identify interacting proteins", p. 131-149. In L. Oñate-Sánchez (ed.), Two-Hybrid Systems: Methods and Protocols. Springer New York, New York, NY. DOI: 10.1007/978-1-4939-7871-7_9".


- A technique for the identification in vivo of the DNA-binding sites for proteins that regulate gene expression in plants

Jarillo, JA; Komar, DN; Piñeiro, M. 2018. "The use of the chromatin immunoprecipitation technique for in vivo identification of plant protein–DNA interactions", p. 323-334. In L. Oñate-Sánchez (ed.), Two-Hybrid Systems: Methods and Protocols. Springer New York, New York, NY. DOI: 10.1007/978-1-4939-7871-7_23".


- Potyvirus-derived nanoparticles for peptide presentation on their surface

Sánchez, F; Ponz, F. 2018. "Presenting peptides at the surface of potyviruses in planta", p. 471-485. In C. Wege and G. P. Lomonossoff (eds.), Virus-Derived Nanoparticles for Advanced Technologies: Methods and Protocols. Springer New York, New York, NY. DOI: 10.1007/978-1-4939-7808-3_31".


- New non-symbiotic bacteria from the genus Neorhizobium

Soenens, A; Imperial, J. 2018. "Novel, non-symbiotic isolates of Neorhizobium from a dryland agricultural soil". PeerJ. DOI: 10.7717/peerj.4776".


- Identified a family of cochaperones involved in plant thermotolerance to high temperatures

Fernández‐Bautista, N; Fernández‐Calvino, L; Muñoz, A; Toribio, R; Mock, HP; Castellano, MM. 2018. "HOP family plays a major role in long term acquired thermotolerance in Arabidopsis". Plant, Cell & Environment. DOI: 10.1111/pce.13326".


- Plant perception and short-term responses to phytophagous insects and mites

Santamaria, ME; Arnaiz, A; Gonzalez-Melendi, P; Martinez, M; Diaz, I. 2018. "Plant perception and short-term responses to phytophagous insects and mites". International Journal of Molecular Sciences. DOI: 10.3390/ijms19051356".


- Gene expression, in vitro activity assays and in silico molecular modeling help elucidate a key chemical transformation of compounds responsible for the organoleptic properties of saffron

Gómez-Gómez, L; Pacios, LF; Diaz-Perales, A; Garrido-Arandia, M; Argandoña, J; Rubio-Moraga, Á; Ahrazem, O. 2018. "Expression and interaction analysis among saffron ALDHs and crocetin dialdehyde". International Journal of Molecular Sciences. DOI: 10.3390/ijms19051409".


- Two new symbiovars, able to nodulate hairy lupin, discovered in Tunisia

Msaddak, A; Rejili, M; Durán, D; Rey, L; Palacios, JM; Imperial, J; Ruiz-Argüeso, T; Mars, M. 2018. "Definition of two new symbiovars, sv. lupini and sv. mediterranense, within the genera Bradyrhizobium and Phyllobacterium efficiently nodulating Lupinus micranthus in Tunisia". Systematic and Applied Microbiology. DOI: 10.1016/j.syapm.2018.04.004".


- Nitrogenase maturation: More than meets the eye

Jimenez-Vicente, E; Yang, ZY; Ray, WK; Echavarri-Erasun, C; Cash, VL; Rubio, LM; Seefeldt, LC; Dean, DR. 2018. "Sequential and differential interaction of assembly factors during nitrogenase MoFe protein maturation". Journal of Biological Chemistry. DOI: 10.1074/jbc.RA118.002994".


- Evaluating the coverage and (re)usability of genotype/phenotype data in independent, widely dispersed databases

Townend, GS; Ehrhart, F; Kranen, HJ; Wilkinson, M; Jacobsen, A; Roos, M; Willighagen, EL; Enckevort, D; Evelo, CT; Curfs, LMG. "MECP2 variation in Rett syndrome ‐ an overview of current coverage of genetic and phenotype data within existing databases". Human Mutation. DOI: 10.1002/humu.23542".


- A combined study of plant transcriptomic responses and spider mite performance in barley doubly-stressed by dehydration and pest infestation

Santamaria, ME; Diaz, I; Martinez, M. 2018. "Dehydration stress contributes to the enhancement of plant defense response and mite performance on barley". Frontiers in Plant Science. DOI: 10.3389/fpls.2018.00458".


- Ecological complexity and host range evolution

McLeish, MJ; Fraile, A; García-Arenal, F. "Ecological complexity in plant virus host range evolution", Advances in Virus Research. Academic Press. DOI: 10.1016/bs.aivir.2018.02.009".


- A new nitrogen-fixing bacteria, Bradyrhizobium algeriense, in retamas of Algeria

Ahnia, H; Bourebaba, Y; Durán, D; Boulila, F; Palacios, JM; Rey, L; Ruiz-Argüeso, T; Boulila, A; Imperial, J. 2018. "Bradyrhizobium algeriense sp. nov., a novel species isolated from effective nodules of Retama sphaerocarpa from Northeastern Algeria". Systematic and Applied Microbiology. DOI: 10.1016/j.syapm.2018.03.004".


- Fluorescent in vivo ROS and redox potential detection in plants

Ortega-Villasante, C; Burén, S; Blázquez-Castro, A; Barón-Sola, Á; Hernández, LE. "Fluorescent in vivo imaging of reactive oxygen species and redox potential in plants". Free Radical Biology and Medicine. DOI: 10.1016/j.freeradbiomed.2018.04.005".


- Plant responses to Sulphur deficiency: An insight from a meta-analysis reveals new regulators and modules related to the carbon and nitrogen responses

Henríquez-Valencia, C; Arenas-M, A; Medina, J; Canales, J. 2018. "Integrative transcriptomic analysis uncovers novel gene modules that underlie the sulfate response in Arabidopsis thaliana". Frontiers in Plant Science. DOI: 10.3389/fpls.2018.00470".


- Identified a mechanism of SWR1-C recruitment to target genes in Arabidopsis

Gómez-Zambrano, Á; Crevillén, P; Franco-Zorrilla, JM; López, JA; Moreno-Romero, J; Roszak, P; Santos-González, J; Jurado, S; Vázquez, J; Köhler, C; Solano, R; Piñeiro, M; Jarillo, JA. 2018. "Arabidopsis SWC4 binds DNA and recruits the SWR1 complex to modulate histone H2A.Z deposition at key regulatory genes". Molecular Plant. DOI: 10.1016/j.molp.2018.03.014".


- Tolerance to plant pathogens

Pagán, I; García-Arenal, F. 2018. "Tolerance to plant pathogens: theory and experimental Evidence". International Journal of Molecular Sciences. DOI: 10.3390/ijms19030810".


- Discovered a new plant immunity mechanism sharing regulatory elements with the stomata developmental pathway

Sopeña-Torres, S; Jordá, L; Sánchez-Rodríguez, C; Miedes, E; Escudero, V; Swami, S; López, G; Piślewska-Bednarek, M; Lassowskat, I; Lee, J; Gu, Y; Haigis, S; Alexander, D; Pattathil, S; Muñoz-Barrios, A; Bednarek, P; Somerville, S; Schulze-Lefert, P; Hahn, MG; Scheel, D; Molina, A. 2018. "YODA MAP3K kinase regulates plant immune responses conferring broad-spectrum disease resistance". New Phytologist. DOI: 10.1111/nph.15007".


- Anthocyanins and flavonols in wild grapes

Revilla, E; Arroyo-Garcia, R; Bellido, A; Carrasco, D; Puig, A; Ruiz-Garcia, L. 2018. "Fingerprints of anthocyanins and flavonols in wild grapes (Vitis vinifera L. ssp. sylvestris (Gmelin) Hegi)". In A. M. Jordão and F. Cosme (eds.), Grapes and Wines - Advances in Production, Processing, Analysis and Valorization. DOI: 10.5772/intechopen.70861".


- Omics of CDF transcription factors

Perez-Alonso, MM; Carrasco-Loba, V; Medina, J; Vicente-Carbajosa, J; Pollmann, S. 2018. "When transcriptomics and metabolomics work hand in hand: A case study characterizing plant CDF transcription factors". High Throughput. DOI: 10.3390/ht7010007".


- Host factors influencing virus prevalence

McLeish, M; Sacristán, S; Fraile, A; García-Arenal, F. 2017. "Scale dependencies and generalism in host use shape virus prevalence". Proceedings of the Royal Society Biological Sciences Series B. DOI: 10.1098/rspb.2017.2066".


- Sublingual immunotherapy for a peach allergen

Palomares, F; Gomez, F; Bogas, G; Campo, P; Perkins, JR; Diaz-Perales, A; Rodriguez, MJ; Prieto, A; Barber, D; Torres, MJ; Mayorga, C. 2018. "Immunological changes induced in peach allergy patients with systemic reactions by Pru p 3 sublingual immunotherapy". Molecular Nutrition & Food Research. DOI: 10.1002/mnfr.201700669".


- A non-host of a plant virus showing only apparent extreme resistance

Sardaru, P; Sinausía, L; López-González, S; Zindovic, J; Sánchez, F; Ponz, F. 2018. "The apparent non-host resistance of Ethiopian mustard to a radish-infecting strain of Turnip mosaic virus is largely determined by the C-terminal region of the P3 viral protein". Molecular Plant Pathology. DOI: 10.1111/mpp.12674".


- Double effect of the overexpression of a cystatin in barley: enhanced resistance against spider mites and changes in the transcriptome

Santamaria, M; Diaz-Mendoza, M; Perez-Herguedas, D; Hensel, G; Kumlehn, J; Diaz, I; Martinez, M. 2018. "Overexpression of HvIcy6 in barley enhances resistance against Tetranychus urticae and entails partial transcriptomic reprogramming". International Journal of Molecular Sciences. DOI: 10.3390/ijms19030697".


- The amazing regenerative plasticity of plants. How is a new organ regenerated after embryogenesis?

Bustillo-Avendaño, E; Ibáñez, S; Sanz, O; Sousa Barros, JA; Gude, I; Perianez-Rodriguez, J; Micol, JL; Del Pozo, JC; Moreno-Risueno, MA; Pérez-Pérez, JM. 2018. "Regulation of Hormonal Control, Cell Reprogramming, and Patterning during De Novo Root Organogenesis". Plant Physiology. DOI: 10.1104/pp.17.00980".


- The genetic diversity of mammal reservoir host populations is a key factor in the emergence of rabies virus epidemics

Rodríguez-Nevado, C; Lam, TTY; Holmes, EC; Pagán, I. 2018. "The impact of host genetic diversity on virus evolution and emergence". Ecology Letters. DOI: 10.1111/ele.12890".


- Silencing barley cystatins HvCPI-2 and HvCPI-4 specifically modifies leaf responses to drought stress

Velasco-Arroyo B, Diaz-Mendoza M, Gomez-Sanchez A, Moreno-Garcia B, Santamaria ME, Torija-Bonilla M, Hensel G, Kumlehn J, Martinez M, Diaz I. 2018. "Silencing barley cystatins HvCPI-2 and HvCPI-4 specifically modifies leaf responses to drought stress". Plant Cell Environ. DOI: 10.1111/pce.13178".


- Population Genomics of Plant Viruses

Pagán, I; García-Arenal, F. "Population Genomics of Plant Viruses", p. 1-33. Springer International Publishing, Cham. DOI: 10.1007/13836_2018_15".


- Proteins implicated in trafficking of lipids in the human immune system provide clues on the sensitization phase of plant allergens

Garrido-Arandia, M; Cuevas-Zuviria, B; Diaz-Perales, A; Pacios, LF. 2018. "A comparative study of human saposins". Molecules. DOI: 10.3390/molecules23020422".


- A different evolution of virus populations in mono or double infections

Domínguez-Rodríguez, S; Rojas, P; Fernández McPhee, C; Pagán, I; Navarro, ML; Ramos, JT; Holguín, Á. 2018. "Effect of HIV/HCV Co-Infection on the Protease Evolution of HIV-1B: A Pilot Study in a Pediatric Population". Scientific Reports. DOI: 10.1038/s41598-018-19312-2".


- Genomic diversity in legume endosymbiotic bacteria

Sánchez-Cañizares, C; Jorrín, B; Durán, D; Nadendla, S; Albareda, M; Rubio-Sanz, L; Lanza, M; González-Guerrero, M; Prieto, R; Brito, B; Giglio, M; Rey, L; Ruiz-Argüeso, T; Palacios, J; Imperial, J. 2018. "Genomic diversity in the endosymbiotic bacterium Rhizobium leguminosarum". Genes. DOI: 10.3390/genes9020060".


- The important role of cell wall in plant immunity

Bacete, L; Mélida, H; Miedes, E; Molina, A. 2018. "Plant cell wall-mediated immunity: Cell wall changes trigger disease resistance responses". Plant Journal. DOI: 10.1111/tpj.13807".


- A Phenotyping Method for Plant-Microbe interaction by Confocal Microscopy

Cabrera, J; Olmo, R; Ruiz-Ferrer, V; Abreu, I; Hermans, C; Martinez-Argudo, I; Fenoll, C; Escobar, C. 2018. "A phenotyping method of giant cells from root-knot nematode feeding sites by confocal microscopy highlights a role for CHITINASE-LIKE 1 in Arabidopsis". International Journal of Molecular Sciences. DOI: 10.3390/ijms19020429 ".


- Loading of cow's milk allergen with the vitamin A metabolite retinoic acid may suppress the protein immunogenicity

Hufnagl, K; Ghosh, D; Wagner, S; Fiocchi, A; Dahdah, L; Bianchini, R; Braun, N; Steinborn, R; Hofer, M; Blaschitz, M; Roth, GA; Hofstetter, G; Roth-Walter, F; Pacios, LF; Jensen-Jarolim, E. 2018. "Retinoic acid prevents immunogenicity of milk lipocalin Bos d 5 through binding to its immunodominant T-cell epitope". Scientific Reports. DOI: 10.1038/s41598-018-19883-0".


- Plant Viruses. Diversity, Interaction and Management. CRC Press

Sánchez, F; Ponz, F. 2018. "Viruses and Plant Development", p. 267-278. In R. Gaur, S. Khurana, and Y. Dorokhov (eds.), Plant Viruses. Diversity, Interaction and Management. CRC Press, Boca Raton. ISBN: 9781138061514 - CAT# K33333.


- A relevant role for a glutathione transferase in plant innate immunity

Piślewska-Bednarek, M; Nakano, RT; Hiruma, K; Pastorczyk, M; Sánchez-Vallet, A; Singkaravanit-Ogawa, S; Ciesiołka, D; Takano, Y; Molina, A; Schulze-Lefert, P; Bednarek, P. 2018. "Glutathione transferase U13 functions in pathogen-triggered glucosinolate metabolism". Plant Physiology. DOI: 10.1104/pp.17.01455".


- Metal tolerance in endosymbiotic bacteria isolated from an ultramafic soil

Rubio-Sanz, L; Brito, B; Palacios, J. 2018. "Analysis of metal tolerance in Rhizobium leguminosarum strains isolated from an ultramafic soil". FEMS Microbiology Letters. DOI: 10.1093/femsle/fny010".


- MtCOPT1 mediates copper uptake by nodule cells in legume Medicago truncatula

Senovilla, M; Castro-Rodríguez, R; Abreu, I; Escudero, V; Kryvoruchko, I; Udvardi, MK; Imperial, J; González-Guerrero, M. 2018. "Medicago truncatula copper transporter 1 (MtCOPT1) delivers copper for symbiotic nitrogen fixation". New Phytologist. DOI: 10.1111/nph.14992".


- A relevant role of cathepsins in stress-induced cell death during barley microspore embryogenesis

Bárány, I; Berenguer, E; Solís, M-T; Pérez-Pérez, Y; Santamaría, ME; Crespo, J-L; Risueño, MC; Díaz, I; Testillano, PS. 2018. "Autophagy is activated and involved in cell death with participation of cathepsins during stress-induced microspore embryogenesis in barley". Journal of Experimental Botany. DOI: 10.1093/jxb/erx455".


- Plant growth promotion by inoculants derived from a sugarcane microbiome culture collection

Armanhi, JSL; de Souza, RSC; Damasceno, NdB; de Araújo, LM; Imperial, J; Arruda, P. 2018. "A community-based culture collection for targeting novel plant growth-promoting bacteria from the sugarcane microbiome". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.02191".


- The leek is also a host of onion yellow dwarf virus

Fernández-Tabanera, E; Fraile, A; Lunello, P; Garcia-Arenal, F; Ayllon, MA. 2018. "First Report of Onion Yellow Dwarf Virus in Leek (Allium ampeloprasum var. porrum) in Spain". Plant Disease. DOI: 10.1094/PDIS-06-17-0892-PDN".



- vacop

Espigares, M. Seoane, P. Bautista, R. Quintana, J. Gómez, L. Claros, M.G. 2017. "Obtaining the most accurate de novo transcriptomes for non-model organisms: the case of Castanea sativa. In: Rojas I., Ortuño F. (eds) Bioinformatics and Biomedical Engineering". pp. 489-499. Springer International Publishing, ISBN: 978-3-319-56153-0. DOI: 10.1007/978-3-319-56154-7_44


- Reactive oxygen species in Rhizobium infections

Arthikala, MK; Montiel, J; Sánchez-López, R; Nava, N; Cárdenas, L; Quinto, C. 2017. "Respiratory burst oxidase homolog gene a is crucial for rhizobium infection and nodule maturation and function in common bean". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.02003".


- A role for salicylic acid in the regulation of small RNAs and gibberellins in virus infections

Križnik, M; Petek, M; Dobnik, D; Ramšak, Ž; Baebler, Š; Pollmann, S; Kreuze, JF; Žel, J; Gruden, K. 2017. "Salicylic acid perturbs srna-gibberellin regulatory network in immune response of potato to potato virus y infection". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.02192".


- Relevance of plant translational regulation

Ferrando, A; Castellano, MM; Lisón, P; Leister, D; Stepanova, AN; Hanson, J. 2017. "Editorial: Relevance of translational regulation on plant growth and environmental responses". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.02170".


- Nickel: the dose makes the poison

Rodrigue, A; Albareda, M; Mandrand-Berthelot, MA; Palacios, J. 2017. "Nickel in Microbial Physiology - From Single Proteins to Complex Trafficking Systems: Nickel Import/Export", p. 237-258. In D. Zamble, M. Rowińska-Żyrek, and H. Kozlowski (eds.), The Biological Chemistry of Nickel. Royal Society of Chemistry. DOI: 10.1039/9781788010580-00237".


- A new saffron potyvirus

Parizad, S; Dizadji, A; Koohi Habibi, M; Winter, S; Kalantari, S; Garcia-Arenal, F; Ayllón, MA. 2017. "Prevalence of saffron latent virus (saLV), a new Potyvirus species, in saffron fields of Iran". Journal of Plant Pathology. DOI: 10.4454/jpp.v99i3.3963".


- Characterization of a possible new effector (MdcE) dependent on the type III secretion system in Bradyrhizobium strains

Durán, D; Imperial, J; Palacios, J; Ruiz-Argüeso, T; Göttfert, M; Zehner, S; Rey, L. 2017. "Characterization of a novel MIIA domain-containing protein (MdcE) in Bradyrhizobium spp". FEMS Microbiology Letters. DOI: 10.1093/femsle/fnx276".


- Nitrate signaling modulates flowering time in Arabidopsis

Gras, DE; Vidal, EA; Undurraga, SF; Riveras, E; Moreno, S; Dominguez-Figueroa, J; Alabadi, D; Blázquez, M; Medina, J; Gutiérrez, RA. 2017. "SMZ/SNZ and gibberellin signaling are required for nitrate-elicited delay of flowering time in Arabidopsis thaliana". Journal of Experimental Botany. DOI: 10.1093/jxb/erx423".


- Citrate is required for iron delivery to nitrogen-fixing nodules

Kryvoruchko, IS; Routray, P; Senjuti, S; Torres-Jerez, I; Tejada-Jiménez, M; Finney, LA; Nakashima, J; Pislariu, CI; Benedito, VA; Gonzalez-Guerrero, M; Roberts, DM; Udvardi, MK. 2017. "An iron-activated citrate transporter, MtMATE67, is required for symbiotic nitrogen fixation". Plant Physiology. DOI: 10.1104/pp.17.01538".


- Engineering nitrogenase for plants and fungi – What is achieved and what remains?

Burén, S; Rubio, LM. 2017. "State of the art in eukaryotic nitrogenase engineering". FEMS Microbiology Letters. DOI: 10.1093/femsle/fnx274".


- About bioinformatic preparation of rare disease data

Roos, M; López Martin, E; Wilkinson, MD. 2017. "Preparing Data at the Source to Foster Interoperability across Rare Disease Resources", p. 165-179. In M. Posada de la Paz, D. Taruscio, and S. C. Groft (eds.), Rare Diseases Epidemiology: Update and Overview. Springer International Publishing, Cham. DOI: 10.1007/978-3-319-67144-4_9".


- A regulation for seed germination based on the physical separation of enzyme and substrate

Carrillo-Barral, N; Matilla, AJ; Rodríguez-Gacio, MdC; Iglesias-Fernández, R. 2017. "Mannans and endo-β-mannanase transcripts are located in different seed compartments during Brassicaceae germination". Planta. DOI: 10.1007/s00425-017-2815-4".


- Another step towards engineering biological nitrogen fixation: diversity of NifB, the key to FeMo-co biosynthesis

Arragain, S; Jiménez-Vicente, E; Scandurra, AA; Burén, S; Rubio, LM; Echavarri-Erasun, C. 2017. "Diversity and Functional Analysis of the FeMo-Cofactor Maturase NifB". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.01947".


- Generation of a synthetic biology toolkit for the expression of heterologous proteins in yeast mitochondria

Pérez-González, A; Kniewel, R; Veldhuizen, M; Verma, HK; Navarro-Rodríguez, M; Rubio, LM; Caro, E. 2017. "Adaptation of the GoldenBraid modular cloning system and creation of a toolkit for the expression of heterologous proteins in yeast mitochondria". BMC Biotechnology. DOI: 10.1186/s12896-017-0393-y".


- Identified a new plant virus species native of evergreen oak forests of the Iberian Peninsula and the factors associated with its incidence and population genetic diversity

Rodríguez-Nevado, C; Montes, N; Pagán, I. 2017. "Ecological factors affecting infection risk and population genetic diversity of a novel potyvirus in its native wild ecosystem". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.01958".


- Arthropod peptidase inhibitors: An example of relationship between gene diversity and biological diversity

Alonso, J; Martinez, M. 2017. "Insights into the molecular evolution of peptidase inhibitors in arthropods". PLoS One. DOI: 10.1371/journal.pone.0187643".


- Iron deficiency and immune responses to allergens able to bind iron chelators

Roth-Walter, F; Pacios, LF; Bianchini, R; Jensen-Jarolim, E. 2017. "Linking iron-deficiency with allergy: role of molecular allergens and the microbiome". Metallomics. DOI: 10.1039/c7mt00241f".


- Machine learning to analyze virus evolution

Rojas Sánchez, P; Cobos, A; Navaro, M; Ramos, JT; Pagán, I; Holguín, Á. 2017. "Impact of clinical parameters in the intrahost evolution of HIV-1 subtype B in pediatric patients: A machine learning approach". Genome Biology and Evolution. DOI: 10.1093/gbe/evx193".


- Viruses manipulate host plants for their own benefit

Vijayan, V; López-González, S; Sánchez, F; Ponz, F; Pagán, I. 2017. "Virulence evolution of a sterilizing plant virus: Tuning multiplication and resource exploitation". Virus Evolution. DOI: 10.1093/ve/vex033".


- New insights in the role of protein N-glycosylation in root development

Manzano, C; Pallero-Baena, M; Silva-Navas, J; Navarro Neila, S; Casimiro, I; Casero, P; Garcia-Mina, JM; Baigorri, R; Rubio, L; Fernandez, JA; Norris, M; Ding, Y; Moreno-Risueno, MA; del Pozo, JC. 2017. "A light-sensitive mutation in Arabidopsis LEW3 reveals the important role of N-glycosylation in root growth and development". Journal of Experimental Botany. DOI: 10.1093/jxb/erx324".


- The gene regulatory module miRNA172/TOE1/FT plays a key role in the feeding sites induced by Meloidogyne javanica in Arabidopsis thaliana

Díaz-Manzano, FE; Cabrera, J; Ripoll, J-J; del Olmo, I; Andrés, MF; Silva, AC; Barcala, M; Sánchez, M; Ruíz-Ferrer, V; de Almeida-Engler, J; Yanofsky, MF; Piñeiro, M; Jarillo, JA; Fenoll, C; Escobar, C. 2018. "A role for the gene regulatory module microRNA172/TARGET OF EARLY ACTIVATION TAGGED 1/FLOWERING LOCUS T (miRNA172/TOE1/FT) in the feeding sites induced by Meloidogyne javanica in Arabidopsis thaliana". New Phytologist. DOI: 10.1111/nph.14839".


- β-glucan-triggered plant innate immunity

Mélida, H; Sopeña-Torres, S; Bacete, L; Garrido-Arandia, M; Jordá, L; López, G; Muñoz, A; Pacios, LF; Molina, A. 2017. "Non-branched β-1,3-glucan oligosaccharides trigger immune responses in Arabidopsis". Plant Journal. DOI: 10.1111/tpj.13755".


- Differential plant gene expression provides insights on the specificity of the symbiosis between different Lupinus species and nitrogen-fixing bacteria of the genus Bradyrhizobium

Keller, J; Imperial, J; Ruiz-Argüeso, T; Privet, K; Lima, O; Michon-Coudouel, S; Biget, M; Salmon, A; Aïnouche, A; Cabello-Hurtado, F. 2017. "RNA sequencing and analysis of three Lupinus nodulomes provide new insights into specific host-symbiont relationships with compatible and incompatible Bradyrhizobium strains". Plant Science. DOI: 10.1016/j.plantsci.2017.10.015".


- The ligand of the major allergen protein from peach is the main player in the induction of allergic sensitization

Tordesillas, L; Cubells-Baeza, N; Gómez-Casado, C; Berin, C; Esteban, V; Barcik, W; O'Mahony, L; Ramirez, C; Pacios, LF; Garrido-Arandia, M; Díaz-Perales, A. 2017. "Mechanisms underlying induction of allergic sensitization by Pru p 3". Clinical & Experimental Allergy. DOI: 10.1111/cea.12962".


- Tolerance is a virus-specific defence in plants

Shukla, A; Pagán, I; García-Arenal, F. 2017. "Effective tolerance based on resource reallocation is a virus-specific defence in Arabidopsis thaliana". Molecular Plant Pathology. DOI: 10.1111/mpp.12629".


- Deciphering the roles of chloroplast ionic transporters

Ruiz-Lau, N; Sáez, Á; Lanza, M; Benito, B. 2017. "Genomic and transcriptomic compilation of chloroplast ionic transporters of Physcomitrella patens. Study of NHAD transporters in Na+ and K+ homeostasis". Plant and Cell Physiology. DOI: 10.1093/pcp/pcx150".


- The wild vine. An important phytogenetic resource without legal protection in Spain

Lara, M; Iriarte-Chiapusso, MJ; Cantos, M; García Jiménez, JL; Morales, R; Ocete, CA; López, MA; Salinas, JA; Rubio, I; Hidalgo, J; Íñiguez, M; Rodríguez, A; Valle, JM; Arroyo-García, R; Ayala, MC; Armendáriz, I; Maghradze, D; Arnold, C; Ocete, R. 2017. "La vid silvestre. Un importante recurso fitogenético sin protección legal en España. The wild vine. An important phytogenetic resource without legal protection in Spain.". Revista Iberoamericana de Viticultura, Agroindustria y Ruralidad.


- Overexpression of DEMETER, a DNA demethylase, promotes early apical bud maturation in poplar

Conde, D; Moreno-Cortés, A; Dervinis, C; Ramos-Sánchez, JM; Kirst, M; Perales, M; González-Melendi, P; Allona, I. 2017. "Overexpression of DEMETER, a DNA demethylase, promotes early apical bud maturation in poplar". Plant, Cell & Environment. DOI: 10.1111/pce.13056".


- A barley protease causes opposite effects against an acari and a fungus

Diaz-Mendoza, M; Velasco-Arroyo, B; Santamaria, ME; Diaz, I; Martinez, M. 2017. "HvPap-1 C1A protease participates differentially in the barley response to a pathogen and an herbivore". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.01585".


- Barley grain size depends on pericarp programmed cell death executed by VPE4

Radchuk, V; Tran, V; Radchuk, R; Diaz-Mendoza, M; Weier, D; Fuchs, J; Riewe, D; Hensel, G; Kumlehn, J; Munz, E; Heinzel, N; Rolletschek, H; Martinez, M; Borisjuk, L. 2017. "Vacuolar processing enzyme 4 contributes to maternal control of grain size in barley by executing programmed cell death in the pericarp". New Phytologist. DOI: 10.1111/nph.14729".


- First active NifB protein purified from a eukaryotic cell

Burén, S; Jiang, X; López-Torrejón, G; Echavarri-Erasun, C; Rubio, LM. 2017. "Purification and in vitro activity of mitochondria targeted nitrogenase cofactor maturase NifB". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.01567".


- Pathogen-specific, plant cell wall-mediated immunity

Escudero, V; Jordá, L; Sopeña-Torres, S; Mélida, H; Miedes, E; Muñoz-Barrios, A; Swami, S; Alexander, D; McKee, LS; Sánchez-Vallet, A; Bulone, V; Jones, AM; Molina, A. 2017. "Alteration of cell wall xylan acetylation trigger defense responses that counterbalance the immune deficiencies of plants impaired in the β subunit of the heterotrimeric G protein". The Plant Journal. DOI: 10.1111/tpj.13660".


- Tpc1, a fungal-specific transcription factor required for polar growth and pathogenesis in the rice blast fungus

Galhano, R; Illana, A; Ryder, LS; Rodríguez-Romero, J; Demuez, M; Badaruddin, M; Martinez-Rocha, AL; Soanes, DM; Studholme, DJ; Talbot, NJ; Sesma, A. 2017. "Tpc1 is an important Zn(II)2Cys6 transcriptional regulator required for polarized growth and virulence in the rice blast fungus". PLoS Pathogens. DOI: 10.1371/journal.ppat.1006516".


- The chromatin protein EARLY BOLTING IN SHORT DAYS regulates seed dormancy in Arabidopsis

Narro-Diego, L; López-González, L; Jarillo, JA; Piñeiro, M. 2017. "The PHD-containing protein EARLY BOLTING IN SHORT DAYS regulates seed dormancy in Arabidopsis". Plant, Cell & Environment. DOI: 10.1111/pce.13046".


- The properties of plant cell wall governing guard cell and stomata opening dynamics inferred by computational modelling

Woolfenden, HC; Bourdais, G; Kopischke, M; Miedes, E; Molina, A; Robatzek, S; Morris, RJ. 2017. "A computational approach for inferring the cell wall properties that govern guard cell dynamics". Plant Journal. DOI: 10.1111/tpj.13640".


- Resistance-breaking mutations in a plant RNA virus inform about virus life history evolution

Bera, S; Moreno-Pérez, MG; García-Figuera, S; Pagán, I; Fraile, A; Pacios, LF; García-Arenal, F. 2017. "Pleiotropic effects of resistance-breaking mutations on particle stability provide insight on life history evolution in a plant RNA virus". Journal of Virology. DOI: 10.1128/jvi.00435-17".


- Molybdenum and zinc uptake by nitrogen-fixing cells in legume nodules

Teejada-Jiménez, M; Gil-Díez, P; León-Mediavilla, J; Wen, J; Mysore, KS; Imperial, J; González-Guerrero, M. 2017. "Medicago truncatula Molybdate Transporter type 1 (MtMOT1.3) is a plasma membrane molybdenum transporter required for nitrogenase activity in root nodules under molybdenum deficiency". New Phytologist. DOI: 10.1111/nph.14739".


Abreu, I; Saéz, Á; Castro-Rodríguez, R; Escudero, V; Rodríguez-Haas, B; Senovilla, M; Larue, C; Grolimund, D; Tejada-Jiménez, M; Imperial, J; González-Guerrero, M. 2017. "Medicago truncatula Zinc-Iron Permease6 provides zinc to rhizobia-infected nodule cells". Plant, Cell & Environment. DOI: 10.1111/pce.13035".


- MtZIP6 is the transporter responsible for zinc uptake by nitrogen-fixing cells in Medicago truncatula nodules

Tejada-Jiménez, M; Gil-Díez, P; León-Mediavilla, J; Wen, J; Mysore, KS; Imperial, J; González-Guerrero, M. 2017. "Medicago truncatula Molybdate Transporter type 1 (MtMOT1.3) is a plasma membrane molybdenum transporter required for nitrogenase activity in root nodules under molybdenum deficiency". New Phytologist. DOI: 10.1111/nph.14739".

Abreu, I; Saéz, Á; Castro-Rodríguez, R; Escudero, V; Rodríguez-Haas, B; Senovilla, M; Larue, C; Grolimund, D; Tejada-Jiménez, M; Imperial, J; González-Guerrero, M. 2017. "Medicago truncatula Zinc-Iron Permease6 provides zinc to rhizobia-infected nodule cells". Plant, Cell & Environment. DOI: 10.1111/pce.13035".


- MtMOT1.3 is the transporter responsibal for molybdenum uptake by nitrogen-fixing cells in Medicago truncatula nodules.

Tejada-Jiménez, M; Gil-Díez, P; León-Mediavilla, J; Wen, J; Mysore, KS; Imperial, J; González-Guerrero, M. 2017. "Medicago truncatula Molybdate Transporter type 1 (MtMOT1.3) is a plasma membrane molybdenum transporter required for nitrogenase activity in root nodules under molybdenum deficiency". New Phytologist. DOI: 10.1111/nph.14739".


Abreu, I; Saéz, Á; Castro-Rodríguez, R; Escudero, V; Rodríguez-Haas, B; Senovilla, M; Larue, C; Grolimund, D; Tejada-Jiménez, M; Imperial, J; González-Guerrero, M. 2017. "Medicago truncatula Zinc-Iron Permease6 provides zinc to rhizobia-infected nodule cells". Plant, Cell & Environment. DOI: 10.1111/pce.13035".


- Chilling-responsive DEMETER-LIKE DNA demethylase mediates in poplar bud break

Conde, D; Le Gac, A-L; Perales, M; Dervinis, C; Kirst, M; Maury, S; González-Melendi, P; Allona, I. 2017. "Chilling responsive DEMETER-LIKE DNA demethylase mediates in poplar bud break". Plant, Cell & Environment. DOI: 10.1111/pce.13019".


- Bacteria-fungus association with mycorrhiza-promoting potential

Cano, JM; Berrocal-Lobo, M; Domínguez-Núñez, JA. 2017. "Growth of Amanita caesarea in the presence of Pseudomonas fluorescens and Bacillus cereus". Fungal Biology. DOI: 10.1016/j.funbio.2017.05.009".


- Plant Cell wall integrity alterations caused by stresses are sensed by molecular pathways involving the Receptor Like Kinase MIK2/LRR KISS

Van der Does, D; Boutrot, F; Engelsdorf, T; Rhodes, J; McKenna, JF; Vernhettes, S; Koevoets, I; Tintor, N; Veerabagu, M; Miedes, E; Segonzac, C; Roux, M; Breda, AS; Hardtke, CS; Molina, A; Rep, M; Testerink, C; Mouille, G; Höfte, H; Hamann, T; Zipfel, C. 2017. "The Arabidopsis leucine-rich repeat receptor kinase MIK2/LRR-KISS connects cell wall integrity sensing, root growth and response to abiotic and biotic stresses". PLoS Genetics. DOI: 10.1371/journal.pgen.1006832".


- Plant-made virus-like nanoparticles log-increase the ability to sense antibodies

González-Gamboa, I; Manrique, P; Sánchez, F; Ponz, F. 2017. "Plant-made potyvirus-like particles used for log-increasing antibody sensing capacity". Journal of Biotechnology. DOI: 10.1016/j.jbiotec.2017.06.014".


- A method to increase yields in the search for protein-protein and protein-DNA interactions

Sánchez-Montesino, R; Oñate-Sánchez, L. 2017. "Yeast one- and two-hybrid high-throughput screenings using arrayed libraries", p. 47-65. In K. Kaufmann and B. Mueller-Roeber (eds.), Plant Gene Regulatory Networks: Methods and Protocols. Springer New York, New York, NY. DOI: 10.1007/978-1-4939-7125-1_5".


- Real-Time monitoring of transcriptional activity in poplar transactivation assays

Ramos-Sánchez, JM; Triozzi, PM; Moreno-Cortés, A; Conde, D; Perales, M; Allona, I. 2017. "Real-time monitoring of PtaHMGB activity in poplar transactivation assays". Plant Methods. DOI: 10.1186/s13007-017-0199-x".


- About giant cell induction in nematode-attacked plants

Olmo, R; Cabrera, J; Moreno-Risueno, MA; Fukaki, H; Fenoll, C; Escobar, C. 2017. "Molecular transducers from roots are triggered in Arabidopsis leaves by root-knot nematodes for successful feeding site formation: A conserved post-embryogenic de novo organogenesis program?". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00875".


- MATI, a novel protein involved in the regulation of herbivore-associated signalling pathways

Santamaría, ME; Martinez, M; Arnaiz, A; Ortego, F; Grbic, V; Diaz, I. 2017. "MATI, a novel protein involved in the regulation of herbivore-associated signaling pathways". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00975".


- Nitrate-dependent sodium uptake for osmotic adjustment

Álvarez-Aragón, R; Rodríguez-Navarro, A. 2017. "Nitrate-dependent shoot sodium accumulation and osmotic functions of sodium in Arabidopsis under saline conditions". Plant Journal. DOI: 10.1111/tpj.13556".


- The proteinaceous nature of an important allergen from prickly salwort pollen

Mas, S; Oeo-Santos, C; Cuesta-Herranz, J; Diaz-Perales, A; Colas, C; Fernandez, J; Barber, D; Rodriguez, R; de Los Rios, V; Barderas, R; Villalba, M. 2017. "A relevant IgE-reactive 28kDa protein identified from Salsola kali pollen extract by proteomics is a natural degradation product of an integral 47kDa polygalaturonase". Biochimica et Biophysica Acta. DOI: 10.1016/j.bbapap.2017.05.007".


- Saffron viruses identified in Iran

Parizad, S; Dizadji, A; Habibi, MK; Mohammadi, GHM; Kalantari, S; Izadpanah, F; García-Arenal, F; Winter, S. 2017. "Identification and partial characterization of the virus infecting saffron (Crocus sativus) in Iran". Iranian Journal of Plant Protection Science. DOI: 10.22059/ijpps.2017.215361.1006735".


- Science in Europe is dangerously weak

Rodríguez-Navarro, A; Narin, F. 2017. "European paradox or delusion—Are european science and economy outdated?". Science and Public Policy. DOI: 10.1093/scipol/scx021 ".


- Microvirga sp, is a new endosymbiont of yellow-lupine (Lupinus luteus) in soils of Northern Tunisia

Msaddak, A; Rejili, M; Duran, D; Rey, L; Imperial, J; Palacios, J; Ruiz-Argueso, T; Mars, M. 2017. "Members of Microvirga and Bradyrhizobium genera are native endosymbiotic bacteria nodulating Lupinus luteus in Northern Tunisian soils". FEMS Microbiology Ecology. DOI: 10.1093/femsec/fix068".


- The olive pathogen Pseudomonas savastanoi pv. savastanoi NCPPB3335 suppresses the plant defense response through the function of two proteins from the HopAO effector family

Castañeda-Ojeda, MP; Moreno-Pérez, A; Ramos, C; López-Solanilla, E. 2017. "Suppression of Plant Immune Responses by the Pseudomonas savastanoi pv. savastanoi NCPPB 3335 Type III Effector Tyrosine Phosphatases HopAO1 and HopAO2". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00680".


- Principal mechanisms that regulate translation initiation in plants

Sesma, A; Castresana, C; Castellano, MM. 2017. "Regulation of translation by TOR, eIF4E and eIF2α in plants: current knowledge, challenges and future perspectives". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00644".


- Factors that affect food-induced anaphylaxis

Benedé, S; Garrido-Arandia, M; Martín-Pedraza, L; Bueno, C; Díaz-Perales, A; Villalba, M. 2017. "Multifactorial modulation of food-induced anaphylaxis". Frontiers in Immunology. DOI: 10.3389/fimmu.2017.00552".


- The protein HOP3 plays an essential role during endoplasmic reticulum stress in plants

Fernández-Bautista, N; Fernández-Calvino, L; Muñoz, A; Castellano, MM. 2017. "HOP3 a new regulator of the ER stress response in Arabidopsis with possible implications in plant development and response to biotic and abiotic stresses". Plant Signaling & Behavior. DOI: 10.1080/15592324.2017.1317421".


- Early branching development of RAV1 engineered poplars, is maintained during a field trial

Moreno-Cortés, A; Ramos-Sánchez, JM; Hernández-Verdeja, T; González-Melendi, P; Alves, A; Simòes, R; Rodrigues, JC; Guijarro, M; Canellas, I; Sixto, H; Allona, I. 2017. "Impact of RAV1-engineering on poplar biomass production: a short-rotation coppice field trial". Biotechnology for Biofuels. DOI: 10.1186/s13068-017-0795-z".


- A new type of bacterial transposon

Bardaji, L; Echeverria, M; Rodriguez-Palenzuela, P; Martinez-Garcia, PM; Murillo, J. 2017. "Four genes essential for recombination define GInts, a new type of mobile genomic island widespread in bacteria". Scientific Reports. DOI: 10.1038/srep46254".


- Improving tomato Biomass Production and Yield under Salinity Stress Conditions using CDF3 Genes

Renau-Morata, B; Molina, RV; Carrillo, L; Cebolla-Cornejo, J; Sánchez-Perales, M; Pollmann, S; Dominguez-Figueroa, J; Corrales, AR; Flexas, J; Vicente-Carbajosa, J; MEDINA, J; Nebauer, S. 2017. "Ectopic expression of CDF3 genes in tomato enhances biomass production and yield under salinity stress conditions". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00660".


- One way to achieve FAIRness when publishing your data

Wilkinson, MD; Verborgh, R; Bonino da Silva Santos, LO; Clark, T; Swertz, MA; Kelpin, FDL; Gray, AJG; Schultes, EA; van Mulligen, EM; Ciccarese, P; Kuzniar, A; Gavai, A; Thompson, M; Kaliyaperumal, R; Bolleman, JT; Dumontier, M. 2017. "Interoperability and FAIRness through a novel combination of Web technologies". PeerJ Computer Science. DOI: 10.7717/peerj-cs.110".


- Revisiting the FAIR Principles for scholarly publication

Mons, B; Neylon, C; Velterop, J; Dumontier, M; da Silva Santos, LOB; Wilkinson, MD. 2017. "Cloudy, increasingly FAIR; revisiting the FAIR Data guiding principles for the European Open Science Cloud". Information Services & Use. DOI: 10.3233/isu-170824".


- Grape berry skin color studies through biochemical and molecular approaches

Ferreira, V; Fernandes, F; Carrasco, D; Hernandez, MG; Pinto-Carnide, O; Arroyo-García, R; Andrade, P; Valentão, P; Falco, V; Castro, I. 2017. "Spontaneous variation regarding grape berry skin color: A comprehensive study of berry development by means of biochemical and molecular markers". Food Research International. DOI: 10.1016/j.foodres.2017.03.050".


- Nitrate-dependent transporters are involved in sodium accumulation in Arabidopsis

Álvarez-Aragón, R; Rodríguez-Navarro, A. 2017. "Nitrate-dependent shoot sodium accumulation and osmotic functions of sodium in Arabidopsis under saline conditions". Plant Journal. DOI: 10.1111/tpj.13556".


- Host plant use by two distinct lineages of the tomato red spider mite, Tetranychus evansi, differing in their distribution range

Santamaría, ME; Auger, P; Martínez, M; Migeon, A; Castañera, P; Díaz, I; Navajas, M; Ortego, F. 2017. "Host plant use by two distinct lineages of the tomato red spider mite, Tetranychus evansi, differing in their distribution range". Journal of Pest Science. DOI: 10.1007/s10340-017-0852-1".


- The pseudokinase MRH1 interacts with the plant potassium channel AKT2 and contributes to its regulation in vivo

Sklodowski, K; Riedelsberger, J; Raddatz, N; Riadi, G; Caballero, J; Chérel, I; Schulze, W; Graf, A; Dreyer, I. 2017. "The receptor-like pseudokinase MRH1 interacts with the voltage-gated potassium channel AKT2". Scientific Reports. DOI: 10.1038/srep44611".


- Measuring jasmonate-auxin crosstalk

Loba, VC; Alonso, M-MP; Pollmann, S. 2017. "Monitoring of crosstalk between jasmonate and auxin in the framework of plant stress responses of roots", p. 175-185. In T. Dandekar and M. Naseem (eds.), Auxins and Cytokinins in Plant Biology: Methods and Protocols. Springer New York, New York, NY. DOI: 10.1007/978-1-4939-6831-2_15".


- Unveiled the nature of the ligand of Pru p 3, the major allergen from peach

Cubells-Baeza, N; Gómez-Casado, C; Tordesillas, L; Ramírez-Castillejo, C; Garrido-Arandia, M; González-Melendi, P; Herrero, M; Pacios, LF; Díaz-Perales, A. 2017. "Identification of the ligand of Pru p 3, a peach LTP". Plant Molecular Biology. DOI: 10.1007/s11103-017-0590-z".


- Genomics of stress-induced senescence

Velasco-Arroyo, B; Diaz-Mendoza, M; Santamaria, ME; Gonzalez-Melendi, P; Gomez-Sanchez, A; Arnaiz, A; Martinez, M; Diaz, I. 2017. "Senescence-associated genes in response to abiotic/biotic stresses", p. 1-21, Progress in Botany. Springer Berlin Heidelberg, Berlin, Heidelberg. DOI: 10.1007/124_2017_1".


- Wild grapevine in Andalusia (South Spain)

Cantos, M; Arroyo-García, R; García, JL; Lara, M; Morales, R; López, MÁ; Gallardo, A; Ocete, CA; Rodríguez, Á; Valle, JM; Vaca, R; González-Maestro, M; Bánáti, H; Ocete, R. 2017. "Current distribution and characterization of the wild grapevine populations in Andalusia (Spain)". Comptes Rendus Biologies. DOI: 10.1016/j.crvi.2017.01.004".


- First attempt to assemble full functional nitrogenase in eukaryotes

Burén, S; Young, EM; Sweeny, EA; Lopez-Torrejón, G; Veldhuizen, M; Voigt, CA; Rubio, LM. 2017. "Formation of nitrogenase NifDK tetramers in the mitochondria of Saccharomyces cerevisiae". ACS synthetic biology. DOI: 10.1021/acssynbio.6b00371".


- CBGP researchers describe new methodologies to characterize plant cell wall Damage-Associated Molecular Patterns regulating immune responses

Bacete, L; Mélida, H; Pattathil, S; Hahn, MG; Molina, A; Miedes, E. 2017. "Characterization of Plant Cell Wall Damage-Associated Molecular Patterns Regulating Immune Responses", p. 13-23. In L. Shan and P. He (eds.), Plant Pattern Recognition Receptors: Methods and Protocols. Springer New York, New York, NY. DOI: 10.1007/978-1-4939-6859-6_2".


- A new mitochondrial component involved in germination and seedling establishment

Restovic, F; Espinoza-Corral, R; Gómez, I; Vicente-Carbajosa, J; Jordana, X. 2017. "An active mitochondrial complex II present in mature seeds contains an embryo-specific iron–sulfur subunit regulated by ABA and bZIP53 and is involved in germination and seedling establishment". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00277".


- Short-Chain Chitin Oligomers: Promoters of Plant Growth

Winkler, A; Dominguez-Nuñez, J; Aranaz, I; Poza-Carrión, C; Ramonell, K; Somerville, S; Berrocal-Lobo, M. 2017. "Short-Chain Chitin Oligomers: Promoters of Plant Growth". Marine Drugs. DOI: 10.3390/md15020040 ".


- Food allergen Pru p 3 effectiveness via sublingual therapy

Gomez, F; Bogas, G; Gonzalez, M; Campo, P; Salas, M; Diaz-Perales, A; Rodriguez, MJ; Prieto, A; Barber, D; Blanca, M; Torres, MJ; Mayorga, C. 2017. "The clinical and immunological effects of Pru p 3 SLIT on peach and peanut allergy in patients with systemic reactions". Clinical & Experimental Allergy. DOI: 10.1111/cea.12901".


- Transcriptional regulators AtbZIP9 and AtAZF2 control the expression of the gene that encodes the protein AtTrxo1 important for the Redox homeostasis upon seed germination

Ortiz-Espín, A; Iglesias-Fernández, R; Calderón, A; Carbonero, P; Sevilla, F; Jiménez, A. 2017. "Mitochondrial AtTrxo1 is transcriptionally regulated by AtbZIP9 and AtAZF2 and affects seed germination under saline conditions". Journal of Experimental Botany. DOI: 10.1093/jxb/erx012".

Calderón, A; Ortiz-Espín, A; Iglesias-Fernández, R; Carbonero, P; Pallardó, FV; Sevilla, F; Jiménez, A. 2017. "Thioredoxin (Trxo1) interacts with proliferating cell nuclear antigen (PCNA) and its overexpression affects the growth of tobacco cell culture". Redox Biology. DOI: 10.1016/j.redox.2017.01.018".


- HOP3 is a new regulator of endoplasmic reticulum stress response

Fernández-Bautista, N; Fernández-Calvino, L; Muñoz, A; Castellano, MM. 2017. "AtHOP3, a member of the HOP family in Arabidopsis, interacts with BiP and plays a major role in the ER stress response". Plant, Cell & Environment. DOI: 10.1111/pce.12927".


- DNA Polymerase epsilon is actively involved in replicative stress sensing

Pedroza-Garcia, J-A; Mazubert, C; del Olmo, I; Bourge, M; Domenichini, S; Bounon, R; Tariq, Z; Delannoy, E; Piñeiro, M; Jarillo, JA; Bergounioux, C; Benhamed, M; Raynaud, C. 2017. "Function of the plant DNA Polymerase epsilon in replicative stress sensing, a genetic analysis". Plant Physiology. DOI: 10.1104/pp.17.00031".


- Root development is regulated by the action of a nitrilase on auxin synthesis in seedlings

Lehmann, T; Janowitz, T; Sánchez-Parra, B; Alonso, M-MP; Trompetter, I; Piotrowski, M; Pollmann, S. 2017. "Arabidopsis NITRILASE 1 contributes to the regulation of root growth and development through modulation of auxin biosynthesis in seedlings". Frontiers in Plant Science. DOI: 10.3389/fpls.2017.00036".


- Important diversity of rhizobia nodulating hairy lupine (Lupinus micranthus) in northern Tunisia

Msaddak, A; Durán, D; Rejili, M; Mars, M; Ruiz-Argüeso, T; Imperial, J; Palacios, J; Rey, L. 2017. "Diverse bacteria affiliated with the genera Microvirga, Phyllobacterium and Bradyrhizobium nodulate Lupinus micranthus growing in soils of Northern Tunisia". Applied and Environmental Microbiology. DOI: 10.1128/aem.02820-16".


- CDF3 orchestrates both flowering time and abiotic stress responses in Arabidopsis

Corrales, A-R; Carrillo, L; Lasierra, P; Nebauer, SG; Dominguez-Figueroa, J; Renau-Morata, B; Pollmann, S; Granell, A; Molina, R-V; Vicente-Carbajosa, J; Medina, J. 2017. "Multifaceted role of Cycling Dof Factor 3 (CDF3) in the regulation of flowering time and abiotic stress responses in Arabidopsis". Plant, Cell & Environment. DOI: 10.1111/pce.12894".


- Gene silencing acts as an antiviral defense mechanism in Botrytis

Donaire, L; Ayllón, MA. 2017. "Deep sequencing of mycovirus-derived small RNAs from Botrytis species". Molecular Plant Pathology. 18(8): 1127-1137. DOI: 10.1111/mpp.12466".



- A new pepper potassium transporter

Ruiz-Lau, N; Bojórquez-Quintal, E; Benito, B; Echevarría-Machado, I; Sánchez-Cach, LA; Medina-Lara, MdF; Martínez-Estévez, M. 2016. "Molecular cloning and functional analysis of a Na+-insensitive K+ transporter of Capsicum chinense Jacq". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.01980".


- The evolution of a key family of transcription factors in the seeds of angiosperm plants

Carbonero, P; Iglesias-Fernández, R; Vicente-Carbajosa, J. 2016. "The AFL subfamily of B3 transcription factors: evolution and function in angiosperm seeds". Journal of Experimental Botany. DOI: 10.1093/jxb/erw458".


- Expression of HKT1 and AKT1 genes correlates with the tolerance to salinity of strawberry

Garriga, M; Raddatz, N; Véry, A-A; Sentenac, H; Rubio-Meléndez, ME; González, W; Dreyer, I. 2017. "Cloning and functional characterization of HKT1 and AKT1 genes of Fragaria spp. − relationship to plant response to salt stress". Journal of Plant Physiology. DOI: 10.1016/j.jplph.2016.12.007".


- Relationship of infection symptoms and viral evolution

Pagán, I; Rojas, P; Ramos, JT; Holguín, A. 2016. "Clinical determinants of HIV-1B between-host evolution and their association with drug resistance in pediatric patients". PLoS One. DOI: 10.1371/journal.pone.0167383".


- A new fungal virus

Illana, A., Marconi, M., Rodriguez-Romero, J., Xu, P., Dalmay, T., Wilkinson, M.D., Ayllon, M.A., and Sesma, A. 2017. Molecular characterization of a novel ssRNA ourmia-like virus from the rice blast fungus Magnaporthe oryzae. Archives of Virology 162, 891-895. doi: 10.1007/s00705-016-3144-9.


- A modification of a plant cell death staining protocol avoids the use of a highly carcinogenic product for researchers

Fernández-Bautista, N; Domínguez-Núñez, JA; Castellano Moreno, MM; Berrocal-Lobo, M. 2016. "Plant tissue trypan blue staining during phytopathogen infection". Bio-protocol. DOI: 10.21769/BioProtoc.2078".


- Understanding factors modulating the evolution of virus populations for efficient control strategies

Pagán, I; Rojas, P; Ramos, JT; Holguín, A. 2016. "Clinical determinants of HIV-1B between-host evolution and their association with drug resistance in pediatric patients". PLoS One. DOI: 10.1371/journal.pone.0167383".


- A new approach for the generation and high-throughput detection of hydrogen-overproducing bacteria

Barahona, E; Jimenez-Vicente, E; Rubio, LM. 2016. "Hydrogen overproducing nitrogenases obtained by random mutagenesis and high-throughput screening". Scientific Reports. DOI: 10.1038/srep38291".


- Very high sensitive quantification of salicylic acid

Loba, VC; Pollmann, S. 2017. "Highly sensitive salicylic acid quantification in milligram amounts of plant tissue", p. 221-229. In J. Kleine-Vehn and M. Sauer (eds.), Plant Hormones: Methods and Protocols. Springer New York, New York, NY. DOI: 10.1007/978-1-4939-6469-7_18".


- OBP4 regulates cell proliferation-and-differentiation balance and pluripotent cell formation

Ramirez-Parra, E; Perianez-Rodriguez, J; Navarro-Neila, S; Gude, I; Moreno-Risueno, MA; del Pozo, JC. 2016. "The transcription factor OBP4 controls root growth and promotes callus formation". New Phytologist. DOI: 10.1111/nph.14315".


- Intestinal epithelial models and food allergy

Cubells-Baeza, N; Verhoeckx, KCM; Larre, C; Denery-Papini, S; Gavrovic-Jankulovic, M; Diaz Perales, A. 2016. "Applicability of epithelial models in protein permeability/transport studies and food allergy". Drug Discovery Today: Disease Models. DOI: 10.1016/j.ddmod.2016.08.002".


- How to Control Cell Boundaries: MYB36-peroxidases –ROS is the Answer

Fernández-Marcos, M; Desvoyes, B; Manzano, C; Liberman, LM; Benfey, PN; del Pozo, JC; Gutierrez, C. 2016. "Control of Arabidopsis lateral root primordium boundaries by MYB36". New Phytologist. DOI: 10.1111/nph.14304".


- Jasmonic acid-mediated protection against pests

Boex-Fontvieille, E; Rustgi, S; Von Wettstein, D; Pollmann, S; Reinbothe, S; Reinbothe, C. 2016. "Jasmonic acid protects etiolated seedlings of Arabidopsis thaliana against herbivorous arthropods". Plant Signaling & Behavior. DOI: 10.1080/15592324.2016.1214349".


- Bioinformatic tools and plant genomics

Martinez, M. 2016. "Computational tools for genomic studies in plants". Current Genomics. Volume 17, Number 6, pp. 509-514


- A review of the role of phytocystatins as defence proteins against herbivorous pests

Martinez, M; Santamaria, M; Diaz-Mendoza, M; Arnaiz, A; Carrillo, L; Ortego, F; Diaz, I. 2016. "Phytocystatins: Defense Proteins against Phytophagous Insects and Acari". International Journal of Molecular Sciences. DOI: 10.3390/ijms17101747".


- An infectious clone of a Turnip mosaic virus isolate belonging to a radish-infecting specialized strain

López-González, S; Aragonés, V; Daròs, J-A; Sánchez, F; Ponz, F. 2016. "An infectious cDNA clone of a radish-infecting Turnip mosaic virus strain". European Journal of Plant Pathology. DOI: 10.1007/s10658-016-1057-9".


- The discovery of a new mycovirus is the key to understand the origins of negative stranded RNA viruses

Donaire, L; Pagán, I; Ayllón, MA. 2016. "Characterization of Botrytis cinerea negative-stranded RNA virus 1, a new mycovirus related to plant viruses, and a reconstruction of host pattern evolution in negative-sense ssRNA viruses". Virology. DOI: http://dx.doi.org/10.1016/j.virol.2016.09.017".


- A strongly allergenic protein facilitates fungal infection in plants

Garrido-Arandia, M; Silva-Navas, J; Ramírez-Castillejo, C; Cubells-Baeza, N; Gómez-Casado, C; Barber, D; Pozo, JC; Melendi, PG; Pacios, LF; Díaz-Perales, A. 2016. "Characterisation of a flavonoid ligand of the fungal protein Alt a 1". Scientific Reports. DOI: 10.1038/srep33468".


- A fungal protein together with its ligand develop a strategy to infect plants

Garrido-Arandia, M; Silva-Navas, J; Ramírez-Castillejo, C; Cubells-Baeza, N; Gómez-Casado, C; Barber, D; Pozo, JC; Melendi, PG; Pacios, LF; Díaz-Perales, A. 2016. "Characterisation of a flavonoid ligand of the fungal protein Alt a 1". Scientific Reports. DOI: 10.1038/srep33468".


- A novel diamagnetic 8 Fe cluster

Guo, Y; Echavarri-Erasun, C; Demuez, M; Jiménez-Vicente, E; Bominaar, EL; Rubio, LM. 2016. "The nitrogenase FeMo-cofactor precursor formed by NifB protein: a diamagnetic cluster containing eight iron atoms". Angewandte Chemie International Edition. DOI: 10.1002/anie.201606447".


- Mo biochemistry for FeMo-co biosynthesis

George, SJ; Hernandez, JA; Jimenez-Vicente, E; Echavarri-Erasun, C; Rubio, LM. 2016. "EXAFS reveals two Mo environments in the nitrogenase iron-molybdenum cofactor biosynthetic protein NifQ". Chemical Communications. DOI: 10.1039/C6CC06370E".


- Factors that diminish transgene expression and what can synthetic biology do to avoid them

Pérez-González, A; Caro, E. 2016. "Hindrances to the efficient and stable expression of transgenes in plant synthetic biology approaches", p. 79-89. In S. Singh (ed.), Systems Biology Application in Synthetic Biology. Springer India, New Delhi. DOI: 10.1007/978-81-322-2809-7_7".


- An important wild grape relic in Southwestern Iberian Peninsula

Arroyo-García, R; Cantos, M; Lara, M; López, M-Á; Gallardo, A; Ocete, CA; Pérez, Á; Bánáti, H; García, JL; Ocete, R. 2016. "Characterization of the largest relic Eurasian wild grapevine reservoir in Southern Iberian Peninsula". Spanish Journal of Agricultural Research. DOI: 10.5424/sjar/2016143-8929".


- Reactive oxygen species have multiple faces

del Pozo, JC. 2016. "Reactive Oxygen Species: from harmful molecules to fine-tuning regulators of stem cell niche maintenance". PLoS Genetics. DOI: 10.1371/journal.pgen.1006251".


- The cost for a virus to overcome plant resistance

Moreno-Pérez, MG; García-Luque, I; Fraile, A; García-Arenal, F. 2016. "Mutations determining resistance-breaking in a plant RNA virus have pleiotropic effects on its fitness that depend on the host environment and on the type, single or mixed, of infection". Journal of Virology. DOI: 10.1128/jvi.00737-16".


- A new circuit controlling herbivore deterrence of etiolated plants

Boex-Fontvieille, E; Rustgi, S; von Wettstein, D; Pollmann, S; Reinbothe, S; Reinbothe, C. 2016. "An ethylene-protected Achilles’ heel of etiolated seedlings for arthropod deterrence". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.01246".


- Evolutionary aspects of translation regulation during abiotic stress and development in plants

Toribio, R; Muñoz, A; Castro-Sanz, AB; Ferrando, A; Berrocal-Lobo, M; Castellano, MM. 2016. "Evolutionary aspects of translation regulation during abiotic stress and development in plants", p. 477-490. In G. Hernández and R. Jagus (eds.), Evolution of the Protein Synthesis Machinery and Its Regulation. Springer International Publishing, Cham. DOI: 10.1007/978-3-319-39468-8_18".


- Plant senescence and proteolysis: two processes with one destiny

Diaz-Mendoza, M; Velasco-Arroyo, B; Santamaria, ME; González-Melendi, P; Martinez, M; Diaz, I. 2016. "Plant senescence and proteolysis: two processes with one destiny". Genetics and Molecular Biology. DOI: 10.1590/1678-4685-GMB-2016-0015".


- Incipient cultivation modulates the evolution of recessive resistance to virus infection in a wild plant

Poulicard, N; Pacios, LF; Gallois, J-L; Piñero, D; García-Arenal, F. 2016. "Human management of a wild plant modulates the evolutionary dynamics of a gene determining recessive resistance to virus infection". PLoS Genetics. DOI: 10.1371/journal.pgen.1006214".


- Sugarcane hosts a rich and diverse fungal and bacterial microbiome with the potential to contribute to the crop’s sustainability

de Souza, RS; Okura, VK; Armanhi, JS; Jorrin, B; Lozano, N; da Silva, MJ; Gonzalez-Guerrero, M; de Araujo, LM; Verza, NC; Bagheri, HC; Imperial, J; Arruda, P. 2016. "Unlocking the bacterial and fungal communities assemblages of sugarcane microbiome". Scientific Reports. DOI: 10.1038/srep28774".


- Computational tools for genomic studies in plants

Martinez, M. 2016. "Computational tools for genomic studies in plants". Current Genomics. DOI: 10.2174/1389202917666160520103447".


- Plant-herbivore interactions: dissection of the cellular pattern of Tetranychus urticae feeding on host plant

Bensoussan, N; Santamaria, ME; Zhurov, V; Diaz, I; Grbic, M; Grbic, V. 2016. "Plant-herbivore interaction: dissection of the cellular pattern of Tetranychus urticae feeding on the host plant". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.01105".


- In vivo redox potential and ROS fluorescent detection in plants

Ortega-Villasante, C; Burén, S; Barón-Sola, Á; Martínez, F; Hernández, LE. 2016. "In vivo ROS and redox potential fluorescent detection in plants: present approaches and future perspectives". Methods. DOI: 10.1016/j.ymeth.2016.07.009".


- A comparative analysis of root uptake of sodium and potassium

Nieves-Cordones, M; Martinez, V; Benito, B; Rubio, F. 2016. "Comparison between Arabidopsis and rice for main pathways of K+ and Na+ uptake by roots". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.00992".


- Microbes’ role in plant transport of metals

González-Guerrero, M; Escudero, VP; Saez, A; Tejada-Jimenez, M. 2016. "Transition metal transport in plant and associated endosymbionts: arbuscular mycorrhizal fungi and Rhizobia". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.01088".


- Vector population density determines plant virus evolution

Betancourt, M; Fraile, A; Milgroom, MG; García-Arenal, F. 2016. "Aphid vector population density determines the emergence of necrogenic satellite RNAs in populations of cucumber mosaic virus". Journal of General Virology. DOI: 10.1099/jgv.0.000435".


- Major food allergens are found in amniotic fluid

Pastor-Vargas, C; Maroto, AS; Díaz-Perales, A; Villalba, M; Esteban, V; Ruiz-Ramos, M; Rodriguez de Alba, M; Vivanco, F; Cuesta-Herranz, J. 2016. "Detection of major food allergens in amniotic fluid: initial allergenic encounter during pregnancy". Pediatric Allergy and Immunology. DOI: 10.1111/pai.12608".


- Amino acid sequence specificities in sodium transporters for salinity tolerance

Ali, A; Raddatz, N; Aman, R; Kim, S; Park, HC; Jan, M; Baek, D; Khan, IU; Oh, D-H; Lee, SY; Bressan, RA; Lee, KW; Maggio, A; Pardo, JM; Bohnert, HJ; Yun, D-J. 2016. "A single amino acid substitution in the sodium transporter HKT1 associated with plant salt tolerance". Plant Physiology. DOI: 10.1104/pp.16.00569".


- The Polymerase Epsilon sub-unit DPB2 is involved in DNA replication, cell cycle regulation and DNA damage response in Arabidopsis

Pedroza-Garcia, JA; Domenichini, S; Mazubert, C; Bourge, M; White, C; Hudik, E; Bounon, R; Tariq, Z; Delannoy, E; del Olmo, I; Piñeiro, M; Jarillo Quiroga, Jose A; Bergounioux, C; Benhamed, M; Raynaud, C. 2016. "Role of the Polymerase ϵ sub-unit DPB2 in DNA replication, cell cycle regulation and DNA damage response in Arabidopsis". Nucleic Acids Research. DOI: 10.1093/nar/gkw449".


- ERECTA and BAK1, two receptor-like kinases interact to regulate immune responses in Arabidopsis

Jordá, L; Sopeña-Torres, S; Escudero, V; Nuñez-Corcuera, B; Delgado-Cerezo, M; Torii, KU; Molina, A. 2016. "ERECTA and BAK1 receptor like kinases interact to regulate immune responses in Arabidopsis". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.00897".


- Identification of nitrogenase cofactor biosynthetic precursors on NifB

Wilcoxen, J; Arragain, S; Scandurra, AA; Jimenez-Vicente, E; Echavarri-Erasun, C; Pollmann, S; Britt, RD; Rubio, LM. 2016. "Electron paramagnetic resonance characterization of three iron–sulfur clusters present in the nitrogenase cofactor maturase NifB from Methanocaldococcus infernus". Journal of the American Chemical Society. DOI: 10.1021/jacs.6b03329".


- The unique structure of snakin-1, a member of the GASA/Snakin superfamily

López, G; Molina, A; Baker, EN; Harris, PWR; Brimble, MA. 2016. "Radiation damage and racemic protein crystallography reveal the unique structure of the GASA/Snakin protein superfamily". Angewandte Chemie International Edition. DOI: 10.1002/anie.201602719".


- Flavonols regulate root light avoidance response and root growth

Silva-Navas, J; Moreno-Risueño, MA; Manzano, C; Téllez-Robledo, B; Navarro-Neila, S; Carrasco, V; Pollmann, S; Gallego, FJ; del Pozo, JC. 2016. "Flavonols mediate root phototropism and growth through regulation of proliferation-to-differentiation transition". Plant Cell. DOI: 10.1105/tpc.15.00857".


- HvPap-1 C1A protease actively participates in barley proteolysis mediated by abiotic stresses

Velasco-Arroyo, B; Diaz-Mendoza, M; Gandullo, J; Gonzalez-Melendi, P; Santamaria, ME; Dominguez-Figueroa, JD; Hensel, G; Martinez, M; Kumlehn, J; Diaz, I. 2016. "HvPap-1 C1A protease actively participates in barley proteolysis mediated by abiotic stresses". Journal of Experimental Botany. DOI: 10.1093/jxb/erw212".


- Diversity of rhizobia that nodulate the hairy lupine (Lupinus micranthus) in poor and dry soils of Algeria and Spain

Bourebaba, Y; Durán, D; Boulila, F; Ahnia, H; Boulila, A; Temprano, F; Palacios, JM; Imperial, J; Ruiz-Argüeso, T; Rey, L. 2016. "Diversity of Bradyrhizobium strains nodulating Lupinus micranthus on both sides of the Western Mediterranean: Algeria and Spain". Systematic and Applied Microbiology. DOI: 10.1016/j.syapm.2016.04.006".


- The N-end rule pathway regulates the defense against a wide range of plant pathogens

de Marchi, R; Sorel, M; Mooney, B; Fudal, I; Goslin, K; Kwasniewska, K; Ryan, PT; Pfalz, M; Kroymann, J; Pollmann, S; Feechan, A; Wellmer, F; Rivas, S; Graciet, E. 2016. "The N-end rule pathway regulates pathogen responses in plants". Scientific Reports. DOI: 10.1038/srep26020".


- Highly similar effectors of type III secretion system in Pseudomonas savastanoi might differentially interact with diverse plant targets

Castañeda-Ojeda, MP; López-Solanilla, E; Ramos, C. 2017. "Differential modulation of plant immune responses by diverse members of the Pseudomonas savastanoi pv. savastanoi HopAF type III effector family". Molecular Plant Pathology. DOI: 10.1111/mpp.12420".


- Novel regulators of the Unfolded Protein Response in Arabidopsis

Hossain, A; Henríquez-Valencia, C; Gómez-Páez, M; Medina, J; Orellana, A; Vicente-Carbajosa, J; Zouhar, J. 2016. "Identification of novel components of the Unfolded Protein Response in Arabidopsis". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.00650".


- An immunological marker derived from a development using plant-derived nanoparticles, has been applied to the diagnosis of a liver disease

Duval, F; Cruz-Vega, DE; González-Gamboa, I; González-Garza, MT; Ponz, F; Sánchez, F; Alarcon-Galvan, G; Moreno-Cuevas, JE. 2016. "Detection of autoantibodies to vascular endothelial growth factor receptor-3 in bile duct ligated rats and correlations with a panel of traditional markers of liver diseases". Disease Markers. DOI: 10.1155/2016/6597970".


- How to publish data that is FAIR (Findable, Accessible, Interoperable and Reusable)

Rodríguez Iglesias, A; Rodríguez González, A; Irvine, AG; Sesma, A; Urban, M; Hammond-Kosack, KE; Wilkinson, MD. 2016. "Publishing FAIR Data: an exemplar methodology utilizing PHI-base". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.00641".


- Plant nutritional status conditions its immune response to a beneficial fungus

Hacquard, S; Kracher, B; Hiruma, K; Münch, PC; Garrido-Oter, R; Thon, MR; Weimann, A; Damm, U; Dallery, J-F; Hainaut, M; Henrissat, B; Lespinet, O; Sacristán, S; Ver Loren van Themaat, E; Kemen, E; McHardy, AC; Schulze-Lefert, P; O/'Connell, RJ. 2016. "Survival trade-offs in plant roots during colonization by closely related beneficial and pathogenic fungi". Nature Communications. DOI: 10.1038/ncomms11362".


- First eukaryote expressing an active nitrogenase component

López-Torrejón, G; Jiménez-Vicente, E; Buesa, JM; Hernandez, JA; Verma, HK; Rubio, LM. 2016. "Expression of a functional oxygen-labile nitrogenase component in the mitochondrial matrix of aerobically grown yeast". Nature Communications. DOI: 10.1038/ncomms11426".


- Physiological and structural properties of a highly allergenic protein from a plant pahogenic fungus

Garrido-Arandia, M; Bretones, J; Gómez-Casado, C; Cubells, N; Díaz-Perales, A; Pacios, LF. 2016. "Computational study of pH-dependent oligomerization and ligand binding in Alt a 1, a highly allergenic protein with a unique fold". Journal of Computer-Aided Molecular Design. DOI: 10.1007/s10822-016-9911-6".


- The role of RNA in fungal virulence

Sesma, A. 2016. "RNA metabolism and regulation of virulence programs in fungi". Seminars in Cell & Developmental Biology. DOI: 10.1016/j.semcdb.2016.03.019".


- Influence of nonsteroidal anti-inflammatory drugs on food allergy

Pascal, M; Muñoz-Cano, R; Milà, J; Sanz, ML; Diaz-Perales, A; Sánchez-López, J; García-Moral, A; Juan, M; Valero, A; Yagüe, J; Picado, C; Bartra, J. 2016. "Nonsteroidal anti-inflammatory drugs enhance IgE-mediated activation of human basophils in patients with food anaphylaxis dependent and independent of nonsteroidal anti-inflammatory drugs". Clinical & Experimental Allergy. DOI: 10.1111/cea.12735".


- Immobilization of an industrial enzyme on nanonets derived from a plant virus

Cuenca, S; Mansilla, C; Aguado, M; Yuste-Calvo, C; Sánchez, F; Sánchez-Montero, JM; Ponz, F. 2016. "Nanonets derived from turnip mosaic virus as scaffolds for increased enzymatic activity of immobilized Candida antarctica lipase B". Frontiers in Plant Science. DOI: 10.3389/fpls.2016.00464".


- Involvement of a lipoxigenase in foliar senescence

Springer, A; Kang, C; Rustgi, S; von Wettstein, D; Reinbothe, C; Pollmann, S; Reinbothe, S. 2016. "Programmed chloroplast destruction during leaf senescence involves 13-lipoxygenase (13-LOX)". Proceedings of the National Academy of Sciences of the United States of America. DOI: 10.1073/pnas.1525747113".


- Arabidopsis dna polymerase épsilon recruits components of polycomb repressor complex to mediate epigenetic gene silencing

Olmo, ID; López, JA; Vázquez, J; Raynaud, C; Piñeiro, M; Jarillo, JA. 2016. "Arabidopsis DNA polymerase epsilon recruits components of Polycomb repressor complex to mediate epigenetic gene silencing". Nucleic Acids Research. DOI: 10.1093/nar/gkw156".


- A new form of plant-microorganism symbiosis discovered at CBGP

Hiruma, K; Gerlach, N; Sacristán, S; Nakano, Ryohei T; Hacquard, S; Kracher, B; Neumann, U; Ramírez, D; Bucher, M; O’Connell, Richard J; Schulze-Lefert, P. 2016. "Root endophyte Colletotrichum tofieldiae confers plant fitness benefits that are phosphate status dependent". Cell. DOI: 10.1016/j.cell.2016.02.028".


- The phospholipid- binding protein GEM is involved in abscisic acid signaling

Mauri, N; Fernandez-Marcos, M; Costas, C; Desvoyes, B; Pichel, A; Caro, E; Gutierrez, C. 2016. "GEM, a member of the GRAM domain family of proteins, is part of the ABA signaling pathway". Scientific Reports. DOI: 10.1038/srep22660".


- The FAIR Principles herald more open, transparent, and reusable scientific data

Wilkinson, MD; Dumontier, M; Aalbersberg, IJ; Appleton, G; Axton, M; Baak, A; Blomberg, N; Boiten, J-W; da Silva Santos, LB; Bourne, PE; Bouwman, J; Brookes, AJ; Clark, T; Crosas, M; Dillo, I; Dumon, O; Edmunds, S; Evelo, CT; Finkers, R; Gonzalez-Beltran, A; Gray, AJG; Groth, P; Goble, C; Grethe, JS; Heringa, J; ’t Hoen, PAC; Hooft, R; Kuhn, T; Kok, R; Kok, J; Lusher, SJ; Martone, ME; Mons, A; Packer, AL; Persson, B; Rocca-Serra, P; Roos, M; van Schaik, R; Sansone, S-A; Schultes, E; Sengstag, T; Slater, T; Strawn, G; Swertz, MA; Thompson, M; van der Lei, J; van Mulligen, E; Velterop, J; Waagmeester, A; Wittenburg, P; Wolstencroft, K; Zhao, J; Mons, B. 2016. "The FAIR Guiding Principles for scientific data management and stewardship". Scientific Data. DOI: 10.1038/sdata.2016.18".


- About the role of proteases in barley seed filling and germination

Velasco-Arroyo, B; Diaz-Mendoza, M; Gandullo, J; Gonzalez-Melendi, P; Santamaria, ME; Dominguez-Figueroa, JD; Hensel, G; Martinez, M; Kumlehn, J; Diaz, I. 2016. "HvPap-1 C1A protease actively participates in barley proteolysis mediated by abiotic stresses". Journal of Experimental Botany. DOI: 10.1093/jxb/erw212".


- Biosafety of forest transgenic trees

Pilate, G; Allona, I; Boerjan, W; Déjardin, A; Fladung, M; Gallardo, F; Häggman, H; Jansson, S; Acker, R; Halpin, C. 2016. "Lessons from 25 Years of GM Tree Field Trials in Europe and Prospects for the Future", p. 67-100. In C. Vettori, F. Gallardo, H. Häggman, V. Kazana, F. Migliacci, G. Pilate, and M. Fladung (eds.), Biosafety of Forest Transgenic Trees: Improving the Scientific Basis for Safe Tree Development and Implementation of EU Policy Directives, vol. 82. Springer Netherlands, Dordrecht. DOI: 10.1007/978-94-017-7531-1_4".


- Can we diagnose allergy to dried fruit and nuts in the Mediterranean area through microarrays?

Goikoetxea, M; D’Amelio, C; Martínez-Aranguren, R; Gamboa, P; Garcia, B; Gómez, F; Fernández, J; Bartra, J; Parra, A; Alvarado, M; Alonso, M; González, E; Terrados, S; Moya, C; Blanca, N; Feo-Brito, F; Villalba, M; Díaz-Perales, A; Sanz, M. 2016. "Is Microarray Analysis Really Useful and Sufficient to Diagnose Nut Allergy in the Mediterranean Area?". Journal of Investigational Allergology and Clinical Immunology. DOI: 10.18176/jiaci.0005".


- Exploring the mechanisms determining multiplicity of infection in plant viruses

Donaire, L; Burgyan, J; Garcia-Arenal, F. 2016. "RNA silencing may play a role in but is not the only determinant of the multiplicity of infection". Journal of Virology. DOI: 10.1128/JVI.02345-15".


- A molecular switch to adapt seeds to their developmental stage

Abraham, Z; Iglesias Fernández, R; Martinez, M; Diaz, I; Carbonero, P; Vicente-Carbajosa, J. 2016. "A developmental switch of gene expression in the barley seed mediated by HvVP1 (Viviparous1) and HvGAMYB interactions". Plant Physiology. DOI: 10.1104/pp.16.00092".


- MYB transcription factors mediate the pathogen-induced regulation of tryptophan metabolism

Frerigmann, H; Piślewska-Bednarek, M; Sánchez-Vallet, A; Molina, A; Glawischnig, E; Gigolashvili, T; Bednarek, P. 2016. "Regulation of pathogen triggered tryptophan metabolism in Arabidopsis thaliana by MYB transcription factors and indole glucosinolate conversion products". Molecular Plant. DOI: 10.1016/j.molp.2016.01.006".


- Virus infection is not always harmful to plants

Fraile, A; García-Arenal, F. 2016. "Environment and evolution modulate plant virus pathogenesis". Current Opinion in Virology. DOI: 10.1016/j.coviro.2016.01.008".


- A method for the identification of DNA binding sites of Arabidopsis proteins that regulate gene expression

Komar, DN; Mouriz, A; Jarillo, JA; Piñeiro, M. 2016. "Chromatin Immunoprecipitation Assay for the Identification of Arabidopsis Protein-DNA Interactions In Vivo". Journal of Visualized Experiments. DOI: 10.3791/53422".


- NADPH oxidases expression pattern determines ROS production in the plant response to pathogen attack

Morales, J; Kadota, Y; Zipfel, C; Molina, A; Torres, M-A. 2016. "The Arabidopsis NADPH oxidases RbohD and RbohF display differential expression patterns and contributions during plant immunity". Journal of Experimental Botany. DOI: 10.1093/jxb/erv558".


- A new mechanism proposed for plant defense against bacterial infections

Pérez-Bueno, ML; Granum, E; Pineda, M; Flors, V; Rodriguez-Palenzuela, P; López-Solanilla, E; Barón, M. 2016. "Temporal and spatial resolution of activated plant defense responses in leaves of Nicotiana benthamiana infected with Dickeya dadantii". Frontiers in Plant Science. DOI: 10.3389/fpls.2015.01209".


- A mycovirus more similar to the plant viruses that to the fungal viruses

Donaire, L; Rozas, J; Ayllón, MA. 2016. "Molecular characterization of Botrytis ourmia-like virus, a mycovirus close to the plant pathogenic genus Ourmiavirus". Virology. DOI: 10.1016/j.virol.2015.11.027".


- Wheat allergy in celiac children

Martín-Muñoz, MF; Rivero, D; Díaz Perales, A; Polanco, I; Quince, S. 2016. "Wheat allergy in celiac children". Pediatric Allergy and Immunology. DOI: 10.1111/pai.12487".


- Different forms of influence on the outcome of virus/plant interaction

Hily, J-M; Poulicard, N; Mora, M-Á; Pagán, I; García-Arenal, F. 2016. "Environment and host genotype determine the outcome of a plant–virus interaction: from antagonism to mutualism". New Phytologist. DOI: 10.1111/nph.13631".



- Circadian clock mediates perennial plant response to the cold

- PEN3 transporter is involved in several metabolic tryptophan pathways

Lu, X; Dittgen, J; Piślewska-Bednarek, M; Molina, A; Schneider, B; Svatoš, A; Doubský, J; Schneeberger, K; Weigel, D; Bednarek, P; Schulze-Lefert, P. 2015. "Mutant allele-specific uncoupling of PENETRATION3 functions reveals engagement of the ATP-binding cassette transporter in distinct tryptophan metabolic pathways". Plant Physiology. DOI: 10.1104/pp.15.00182".


- Improving Scientific Reproducibility

Aranguren, ME; Wilkinson, MD. 2015. "Enhanced reproducibility of SADI web service workflows with Galaxy and Docker". GigaScience. DOI: 10.1186/s13742-015-0092-3".


- A proteomics study dissects the heat stress response leading to plant survival or death

Echevarría-Zomeño, S; Fernández-Calvino, L; Castro-Sanz, AB; López, JA; Vázquez, J; Castellano, MM. 2015. "Dissecting the proteome dynamics of the early heat stress response leading to plant survival or death in Arabidopsis". Plant, Cell & Environment. DOI: 10.1111/pce.12664".


- Retrotransposons as source of effectors of a phytopathogenic fungus

Amselem, J; Vigouroux, M; Oberhaensli, S; Brown, JK; Bindschedler, LV; Skamnioti, P; Wicker, T; Spanu, PD; Quesneville, H; Sacristan, S. 2015. "Evolution of the EKA family of powdery mildew avirulence-effector genes from the ORF 1 of a LINE retrotransposon". BMC Genomics. DOI: 10.1186/s12864-015-2185-x".


- About mathematical modelling plant virus infections

Fraile, A; García-Arenal, F. 2015. "Modelling infection dynamics and evolution of viruses in plant populations", p. 89-93. In M. Corbera, J. M. Cors, J. Llibre, and A. Korobeinikov (eds.), Trends in Mathematics, vol. 4. Springer International Publishing, Switzerland. DOI: 10.1007/978-3-319-22129-8_16".


- Structural analyses help to explain the interplay between exogenous and human lipocalins in innate immunity and allergenicity

Jensen-Jarolim, E; Pacios, LF; Bianchini, R; Hofstetter, G; Roth-Walter, F. 2015. "Structural similarities of human & mammalian lipocalins, and their function in innate immunity and allergy". Allergy. DOI: 10.1111/all.12797".


- Identification of the mechanism that regulates continuous tissue formation in plants

Moreno-Risueno, MA; Sozzani, R; Yardımcı, GG; Petricka, JJ; Vernoux, T; Blilou, I; Alonso, J; Winter, CM; Ohler, U; Scheres, B; Benfey, PN. 2015. "Transcriptional control of tissue formation throughout root development". Science. DOI: 10.1126/science.aad1171".


- Indentification of the first master regulator of nutrient flux in plants through formation of ion diffusion barrier

Liberman, LM; Sparks, EE; Moreno-Risueno, MA; Petricka, JJ; Benfey, PN. 2015. "MYB36 regulates the transition from proliferation to differentiation in the Arabidopsis root". Proceedings of the National Academy of Sciences. DOI: 10.1073/pnas.1515576112".


- PHYB-HOS1-CO module integrates red-light signals into Arabidopsis flowering

Lazaro, A; Mouriz, A; Piñeiro, M; Jarillo, JA. 2015. "Red light-mediated degradation of CONSTANS by the E3 ubiquitin ligase HOS1 regulates photoperiodic flowering in Arabidopsis". Plant Cell. DOI: 10.1105/tpc.15.00529".


- Lights and Shadows of Polyploidy in Plants

del Pozo, JC; Ramirez-Parra, E. 2015. "Whole genome duplications in plants: an overview from Arabidopsis". Journal of Experimental Botany. DOI: 10.1093/jxb/erv432".


- Evolution of potassium channels in plants and animals

Riedelsberger, J; Dreyer, I; Gonzalez, W. 2015. "Outward rectification of voltage-gated K+ channels evolved at least twice in life history". PLoS One. DOI: 10.1371/journal.pone.0137600".


- Long-term management agricultural systems under semiarid conditions

Martín-Lammerding, D; Navas, M; Albarrán, MdM; Tenorio, JL; Walter, I. 2015. "LONG term management systems under semiarid conditions: Influence on labile organic matter, β-glucosidase activity and microbial efficiency". Applied Soil Ecology. DOI: 10.1016/j.apsoil.2015.08.021".


- Infections caused by closely related plant viruses differentially alter plant developmental pattern

Sánchez, F; Manrique, P; Mansilla, C; Lunello, P; Wang, X; Rodrigo, G; López-González, S; Jenner, C; González-Melendi, P; Elena, SF; Walsh, J; Ponz, F. 2015. "Viral strain-specific differential alterations in Arabidopsis developmental patterns". Molecular Plant-Microbe Interactions. DOI: 10.1094/MPMI-05-15-0111-R".


- Deleterious effects of salinity on higher plants

Álvarez-Aragón, R; Haro, R; Benito, B; Rodríguez-Navarro, A. 2015. "Salt intolerance in Arabidopsis: shoot and root sodium toxicity, and inhibition by sodium-plus-potassium overaccumulation". Planta. DOI: 10.1007/s00425-015-2400-7".


- Fully biological high-yield process for the sustainable production of biodiesel

Do Nascimento, M; Sanchez Rizza, L; Arruebarrena Di Palma, A; Dublan, MdlA; Salerno, G; Rubio, LM; Curatti, L. 2015. "Cyanobacterial biological nitrogen fixation as a sustainable nitrogen fertilizer for the production of microalgal oil". Algal Research. DOI: 10.1016/j.algal.2015.08.017".


- Sustainable agriculture through the root system

Silva-Navas, J; Moreno-Risueno, MA; Manzano, C; Pallero-Baena, M; Navarro-Neila, S; Téllez-Robledo, B; Garcia-Mina, JM; Baigorri, R; Javier Gallego, F; del Pozo, JC. 2015. "D-Root: a system to cultivate plants with the root in darkness or under different light conditions". Plant Journal. DOI: 10.1111/tpj.12998".


- Allelic variation of domestication genes in natural grapevine populations

Carrasco, D; De Lorenzis, G; Maghradze, D; Revilla, E; Bellido, A; Failla, O; Arroyo-García, R. 2015. "Allelic variation in the VvMYBA1 and VvMYBA2 domestication genes in natural grapevine populations (Vitis vinifera ssp sylvestris)". Plant Syst and Evol. DOI: 10.1007/s00606-014-1181-y".


- Identification of grape berry skin color mutants and polyphenolic profile

Ferreira, V; Fernandes, F; Pinto-Carnide, O; Valentão, P; Falco, V; Martín, JP; Ortiz, JM; Arroyo-García, R; Andrade, PB; Castro, I. 2016. "Identification of Vitis vinifera L. grape berry skin color mutants and polyphenolic profile". Food Chemistry. DOI: 10.1016/j.foodchem.2015.07.142".


- A transcription factor playing an important role in plant low-energy response

Mair, A; Pedrotti, L; Wurzinger, B; Anrather, D; Simeunovic, A; Weiste, C; Valerio, C; Dietrich, K; Kirchler, T; Nägele, T; Vicente Carbajosa, J; Hanson, J; Baena-González, E; Chaban, C; Weckwerth, W; Dröge-Laser, W; Teige, M. 2015. "SnRK1-triggered switch of bZIP63 dimerization mediates the low-energy response in plants". eLIFE. DOI: 10.7554/eLife.05828".


- Two interconnected signaling pathways in root response to soil salinity

Hartmann, L; Pedrotti, L; Weiste, C; Fekete, A; Schierstaedt, J; Göttler, J; Kempa, S; Krischke, M; Dietrich, K; Mueller, MJ; Vicente-Carbajosa, J; Hanson, J; Dröge-Laser, W. 2015. "Crosstalk between two bZIP signaling pathways orchestrates salt-induced metabolic reprogramming in Arabidopsis roots". Plant Cell. DOI: 10.1105/tpc.15.00163".


- Relevant technical improvements in walnut micropropagation

Licea-Moreno, RJ; Contreras, A; Morales, AV; Urban, I; Daquinta, M; Gomez, L. 2015. "Improved walnut mass micropropagation through the combined use of phloroglucinol and FeEDDHA". Plant Cell, Tissue and Organ Culture. DOI: 10.1007/s11240-015-0822-3".


- A recombinant allergen from prickly saltwort, an allergenic plant, displays immunological properties similar to the natural one

Mas, S; Boissy, P; Monsalve, RI; Cuesta-Herranz, J; Díaz-Perales, A; Fernández, J; Colás, C; Rodríguez, R; Barderas, R; Villalba, M. 2015. "A recombinant Sal k 1 isoform as an alternative to the polymorphic allergen from Salsola kali pollen for allergy diagnosis". International Archives of Allergy and Immunology. DOI: 10.1159/000434680".


- A synthetic compound activates the yeast endocytic trafficking

Vasquez-Soto, B; Manriquez, N; Cruz-Amaya, M; Zouhar, J; Raikhel, NV; Norambuena, L. 2015. "Sortin2 enhances endocytic trafficking towards the vacuole in Saccharomyces cerevisiae". Biological Research. DOI: 10.1186/s40659-015-0032-9".


- Functional genomics of symbiotic nitrogen fixation in legumes

Sinharoy, S; Kryvoruchko, IS; Pislariu, CI; González-Guerrero, M; Benedito, VA; Udvardi, M. 2015. "Functional genomics of symbiotic nitrogen fixation in legumes with a focus on transcription factors and membrane transporters", p. 823-836. In F. J. de Bruijn (ed.), Biological Nitrogen Fixation, vol. 2. John Wiley & Sons, Inc.

- Assessment of chilean genetic diversity of nitrogen-fixing bacteria

Baginsky, C; Brito, B; Scherson, R; Pertuzé, R; Seguel, O; Cañete, A; Araneda, C; Johnson, WE. 2015. "Genetic diversity of Rhizobium from nodulating beans grown in a variety of Mediterranean climate soils of Chile". Archives of Microbiology. DOI: 10.1007/s00203-014-1067-y".


- Involvement of an aquaporin in strawberry ripening

Molina-Hidalgo, FJ; Medina-Puche, L; Gelis, S; Ramos, J; Sabir, F; Soveral, G; Prista, C; Iglesias-Fernández, R; Caballero, JL; Muñoz-Blanco, J; Blanco-Portales, R. 2015. "Functional characterization of FaNIP1;1 gene, a ripening-related and receptacle-specific aquaporin in strawberry fruit". Plant Science. DOI: 10.1016/j.plantsci.2015.06.013".


- A novel bioinformatic tool for the predicition of bacterial secretion systems

Martinez-Garcia, PM; Ramos, C; Rodriguez-Palenzuela, P. 2015. "T346Hunter: a novel web-based tool for the prediction of type III, type IV and type VI secretion systems in bacterial genomes". PLoS One. DOI: 10.1371/journal.pone.0119317".


- Beneficial-strain singularities revealed by genomic studies of bacterial genomes

Magno-Pérez, C; Martínez-García, PM; Hierrezuelo, J; Rodriquez-Palenzuela, P; Arrebola, E; Ramos, C; de Vicente, A; Pérez-García, A; Romero, DF. 2015. "Comparative genomics within the Bacillus genus reveal the singularities of two robust Bacillus amyloliquefaciens biocontrol strains". Molecular Plant-Microbe Interactions. DOI: 10.1094/MPMI-02-15-0023-R".


- Interspecies transmission, biodiversity loss and virus emergence

Gessain, A; García-Arenal, F. 2015. "Editorial overview: Emerging viruses: interspecies transmission". Current Opinion in Virology. DOI: http://dx.doi.org/10.1016/j.coviro.2015.02.001".


- Do virus-resistant transgenic plants favour virus emergence?

Tepfer, M; Jacquemond, M; García-Arenal, F. 2015. "A critical evaluation of whether recombination in virus-resistant transgenic plants will lead to the emergence of novel viral diseases". New Phytologist. DOI: 10.1111/nph.13358".


- An efficient method to study aphid resistance to insecticides

Garzo, E; Moreno, A; Hernando, S; Mariño, V; Torne, M; Santamaria, ME; Díaz, I; Fereres, A. 2015. "Electrical Penetration Graph technique as a tool to monitor early stages of aphid resistance to insecticides". Pest Management Science. DOI: 10.1002/ps.4041".


- A study about fungus (A. nidulans) light perception dependence

Hedtke, M; Rauscher, S; Röhrig, J; Rodriguez, J; Yu, Z; Fischer, R. 2015. "Light-dependent gene activation in Aspergillus nidulans is strictly dependent on phytochrome and involves the interplay of phytochrome and white-collar-regulated histone H3 acetylation". Molecular Microbiology. DOI: 10.1111/mmi.13062".


- Inhibitory Properties of Cysteine Protease Pro-Peptides from Barley Confer Resistance to Spider Mite Feeding

Santamaria, ME; Arnaiz, A; Diaz-Mendoza, M; Martinez, M; Diaz, I. 2015. "Inhibitory properties of cysteine protease pro-peptides from barley confer resistance to spider mite feeding". PLoS One. DOI: 10.1371/journal.pone.0128323".


- An RNA-binding protein mediates plant responses to a fungal pathogen without negatively affecting plant growth

Thatcher, LF; Kamphuis, LG; Hane, JK; Oñate-Sánchez, L; Singh, KB. 2015. "The Arabidopsis KH-Domain RNA-Binding protein ESR1 functions in components of jasmonate signalling, unlinking growth restraint and resistance to stress". PLoS One. DOI: 10.1371/journal.pone.0126978".


- Transgenic improvement of lignocellulose digestibility

Pawar, PM-A; Derba-Maceluch, M; Chong, S-L; Gómez, LD; Miedes, E; Banasiak, A; Ratke, C; Gaertner, C; Mouille, G; McQueen-Mason, SJ; Molina, A; Sellstedt, A; Tenkanen, M; Mellerowicz, EJ. 2015. "Expression of fungal acetyl xylan esterase in Arabidopsis thaliana improves saccharification of stem lignocellulose". Plant Biotechnology Journal. DOI: 10.1111/pbi.12393".


- Histone variant H2A.Z mediates different aspects of chromatin function and modulates flowering responses in Arabidopsis

Jarillo, JA; Piñeiro, M. 2015. "H2A.Z mediates different aspects of chromatin function and modulates flowering responses in Arabidopsis". Plant Journal. DOI: 10.1111/tpj.12873".


- What are the proteases involved in the digestive process of the phytophagous spider mite, Tetranychyus urticae?

Santamaría, ME; González-Cabrera, J; Martínez, M; Grbic, V; Castañera, P; Díaz, l; Ortego, F. 2015. "Digestive proteases in bodies and faeces of the two-spotted spider mite, Tetranychus urticae". Journal of Insect Physiology. DOI: http://dx.doi.org/10.1016/j.jinsphys.2015.05.002".


- Role of the circadian clock in cold acclimation and winter dormancy in perennial plants

Johansson, M; Ramos-Sánchez, JM; Conde, D; Ibáñez, C; Takata, N; Allona, I; Eriksson, ME. 2015. "Role of the circadian clock in cold acclimation and winter dormancy in perennial plants", p. 51-74. In J. V. Anderson (ed.), Advances in Plant Dormancy. Springer International Publishing.


- A role for mannan-degradative enzymes found in the germination of grasses

González-Calle, V; Barrero-Sicilia, C; Carbonero, P; Iglesias-Fernández, R. 2015. "Mannans and endo-β-mannanases (MAN) in Brachypodium distachyon: expression profiling and possible role of the BdMAN genes during coleorhiza-limited seed germination". Journal of Experimental Botany. DOI: 10.1093/jxb/erv168".


- A novel locus involved in septic shock discovered through genome-wide association studies (GWAS)

Nakada, T; Boyd, JH; Russell, JA; Aguirre-Hernández, R; Wilkinson, MD; Thair, SA; Nakada, E; McConechy, MK; Fjell, CD; Walley, KR. 2015. "VPS13D gene variant is associated with altered IL-6 production and mortality in septic shock". Journal of Innate Immunity. DOI: 10.1159/000381265".


- Viral epidemics clarified through molecular epidemiology

Franco, L; Pagán, I; Serre Del Cor, N; Schunk, M; Neumayr, A; Molero, F; Potente, A; Hatz, C; Wilder-Smith, A; Sánchez-Seco, MP; Tenorio, A. 2015. "Molecular epidemiology suggests Venezuela as the origin of the dengue outbreak in Madeira, Portugal in 2012-2013". Clinical Microbiology and Infection. DOI: 10.1016/j.cmi.2015.03.016".


- Research assessment based on infrequent achievements

Rodríguez-Navarro, A. 2015. "Research assessment based on infrequent achievements: A comparison of the United States and Europe in terms of highly cited papers and Nobel Prizes". Journal of the Association for Information Science and Technology. DOI: 10.1002/asi.23412".


- Identification of the transporter responsible for iron uptake by nitrogen-fixing cells in model legume Medicago truncatula

Tejada-Jiménez, M; Castro-Rodríguez, R; Kryvoruchko, I; Lucas, MM; Udvardi, M; Imperial, J; González-Guerrero, M. 2015. "MtNramp1 is required for iron uptake by rhizobia-infected Medicago truncatula nodule cells". Plant Physiology. DOI: 10.1104/pp.114.254672".


- A new fluorescent tool useful for melon breeding programs against Fusarium infections

Ramos, B; López, G; Molina, A. 2015. "Development of a Fusarium oxysporum f. sp. melonis functional GFP fluorescence tool to assist melon resistance breeding programs". Plant Pathology. DOI: 10.1111/ppa.12367".


- Exploring the potential of Escherichia coli for biofuel research

Bolonio, D; Llamas, A; Rodríguez-Fernández, J; Al-Lal, AM; Canoira, L; Lapuerta, M; Gómez, L. 2015. "Estimation of cold flow performance and oxidation stability of fatty acid ethyl esters from lipids obtained from Escherichia coli". Energy & Fuels. DOI: 10.1021/acs.energyfuels.5b00141".


- Dessication survival mediated by abscisic-acid dependent stomatal closure

Lind, C; Dreyer, I; López-Sanjurjo, Enrique J; von Meyer, K; Ishizaki, K; Kohchi, T; Lang, D; Zhao, Y; Kreuzer, I; Al-Rasheid, Khaled AS; Ronne, H; Reski, R; Zhu, J-K; Geiger, D; Hedrich, R. 2015. "Stomatal guard cells co-opted an ancient ABA-dependent desiccation survival system to regulate stomatal closure". Current Biology. DOI: 10.1016/j.cub.2015.01.067".


- Methyl jasmonate tomato seed-priming induces resistance to a fungal infection

Król, P; Igielski, R; Pollmann, S; Kępczyńska, E. 2015. "Priming of seeds with methyl jasmonate induced resistance to hemi-biotroph Fusarium oxysporum f.sp. lycopersici in tomato via 12-oxo-phytodienoic acid, salicylic acid, and flavonol accumulation". Journal of Plant Physiology. DOI: 10.1016/j.jplph.2015.01.018".


- Enhanced susceptibility to virus infections mediated by dark-inducible senescence-associated genes

Fernández-Calvino, L; Guzmán-Benito, I; Del Toro, FJ; Donaire, L; Castro-Sanz, AB; Ruíz-Ferrer, V; Llave, C. 2016. "Activation of senescence-associated dark-inducible genes during infection contributes to enhance susceptibility to plant viruses". Molecular Plant Pathology. DOI: 10.1111/mpp.12257".


- Primary cell walls lignified? Yes, it´s feasible

Mélida, H; Largo-Gosens, A; Novo-Uzal, E; Santiago, R; Pomar, F; García, P; García-Angulo, P; Acebes, JL; Álvarez, J; Encina, A. 2015. "Ectopic lignification in primary cellulose-deficient cell walls of maize cell suspension cultures". Journal of Integrative Plant Biology. DOI: 10.1111/jipb.12346".


- What steps in metagenomic sample preparation lead to quantitative biases in the result?

Pawluczyk, M; Weiss, J; Links, MG; Egaña Aranguren, M; Wilkinson, MD; Egea-Cortines, M. 2015. "Quantitative evaluation of bias in PCR amplification and next-generation sequencing derived from metabarcoding samples". Analytical and Bioanalytical Chemistry. DOI: 10.1007/s00216-014-8435-y".


- Characterization of a pathogenicity-related protein that regulates in planta growth in the rice blast fungus

Rodriguez-Romero, J; Franceschetti, M; Bueno, E; Sesma, A. 2015. "Multilayer regulatory mechanisms control cleavage factor I proteins in filamentous fungi". Nucleic Acids Research. DOI: 10.1093/nar/gku1297 ".


- Role of bacterial chemoreceptors in the perception of compounds released in plant wounds

Río-Álvarez, I; Muñoz-Gómez, C; Navas-Vásquez, M; García-Martínez, PM; Antúnez-Lamas, M; Rodríguez-Palenzuela, P; López-Solanilla, E. 2014. "Role of Dickeya dadantii 3937 chemoreceptors in the entry to Arabidopsis leaves through wounds". Molecular Plant Pathology. DOI: 10.1111/mpp.12227".


- Measles virus genetic evolution throughout an imported epidemic outbreak in a highly vaccinated population

Muñoz-Alía, MÁ; Fernández-Muñoz, R; Casasnovas, JM; Porras-Mansilla, R; Serrano-Pardo, Á; Pagán, I; Ordobás, M; Ramírez, R; Celma, ML. 2015. "Measles virus genetic evolution throughout an imported epidemic outbreak in a highly vaccinated population". Virus Research. DOI: 10.1016/j.virusres.2014.11.015".


- How ecosystem simplification influences plant virus emergence

Roossinck, MJ; García-Arenal, F. 2015. "Ecosystem simplification, biodiversity loss and plant virus emergence". Current Opinion in Virology. DOI: 10.1016/j.coviro.2015.01.005".


- Tillage practice influence on gas emission of vetch cropping systems

Tellez-Rio, A; García-Marco, S; Navas, M; López-Solanilla, E; Rees, RM; Tenorio, JL; Vallejo, A. 2015. "Nitrous oxide and methane emissions from a vetch cropping season are changed by long-term tillage practices in a Mediterranean agroecosystem". Biology and Fertility of Soils. DOI: 10.1007/s00374-014-0952-5".


- The complete genome sequence of an indigenous olive endophyte bacterium, a biocontrol agent

Martínez-García, PM; Ruano-Rosa, D; Schilirò, E; Prieto, P; Ramos, C; Rodríguez-Palenzuela, P; Mercado-Blanco, J. 2015. "Complete genome sequence of Pseudomonas fluorescens strain PICF7, an indigenous root endophyte from olive (Olea europaea L.) and effective biocontrol agent against Verticillium dahliae". Standards in Genomic Sciences. DOI: 10.1186/1944-3277-10-10".


- Characterization of the Rhizobium leguminosarum nickel permease HupE

Albareda, M; Rodrigue, A; Brito, B; Ruiz-Argueso, T; Imperial, J; Mandrand-Berthelot, M-A; Palacios, J. 2015. "Rhizobium leguminosarum HupE is a highly-specific diffusion facilitator for nickel uptake". Metallomics. DOI: 10.1039/C4MT00298A".


- Tomato and Arabidopsis respond differentially to spider mite (Tetranychus urtciae) attack

Martel, C; Zhurov, V; Navarro, M; Martinez, M; Cazaux, M; Auger, P; Migeon, A; Santamaria, ME; Wybouw, N; Diaz, I; Van Leeuwen, T; Navajas, M; Grbic, M; Grbic, V. 2015. "Tomato Whole Genome Transcriptional Response to Tetranychus urticae Identifies Divergence of Spider Mite-Induced Responses Between Tomato and Arabidopsis". Molecular Plant-Microbe Interactions. DOI: 10.1094/MPMI-09-14-0291-FI".


- Population genomics of the legume-Rhizobium leguminosarum symbiosis

Jorrin, B; Imperial, J. 2015. "Population genomics analysis of legume host preference for specific rhizobial genotypes in the Rhizobium leguminosarum bv. viciae symbioses". Molecular Plant-Microbe Interactions. DOI: 10.1094/MPMI-09-14-0296-FI".


- Similar potassium channels are used by plants and animals to sense the environment

González, W; Valdebenito, B; Caballero, J; Riadi, G; Riedelsberger, J; Martínez, G; Ramírez, D; Zúñiga, L; Sepúlveda, F; Dreyer, I; Janta, M; Becker, D. "K2P channels in plants and animals". Pflügers Archiv - European Journal of Physiology. DOI: 10.1007/s00424-014-1638-4".


- Epigenomics relevance in shaping up plant genomes

- Gas emissions in a fallow-wheat rotation system under low nitrogen input and conventional tillage

Tellez-Rio, A; García-Marco, S; Navas, M; López-Solanilla, E; Tenorio, JL; Vallejo, A. 2015. "N2O and CH4 emissions from a fallow–wheat rotation with low N input in conservation and conventional tillage under a Mediterranean agroecosystem". Science of the Total Environment. DOI: 10.1016/j.scitotenv.2014.11.041".



- How plants erase the memory of winter

Crevillén, P; Yang, H; Cui, X; Greeff, C; Trick, M; Qiu, Q; Cao, X; Dean, C. 2014. "Epigenetic reprogramming that prevents transgenerational inheritance of the vernalized state". Nature. DOI: 10.1038/nature13722".


- Mycovirus of the fungus Botrytis cinerea

Rodríguez-García, C; Medina, V; Alonso, A; Ayllón, MA. 2014. "Mycoviruses of Botrytis cinerea isolates from different hosts". Annals of Applied Biology. DOI: 10.1111/aab.12073".


- Reciprocal responses in the interaction between Arabidopsis and spider mite

Zhurov, V; Navarro, M; Bruinsma, KA; Arbona, V; Santamaria, ME; Cazaux, M; Wybouw, N; Osborne, EJ; Ens, C; Rioja, C; Vermeirssen, V; Rubio-Somoza, I; Krishna, P; Diaz, I; Schmid, M; Gómez-Cadenas, A; Van de Peer, Y; Grbić, M; Clark, RM; Van Leeuwen, T; Grbić, V. 2014. "Reciprocal responses in the interaction between Arabidopsis and the cell-content-feeding Chelicerate herbivore spider mite". Plant Physiology. DOI: 10.1104/pp.113.231555".


- First role assigned to a ferredoxin in nitrogenase biosynthesis

Jiménez-Vicente, E; Navarro-Rodríguez, M; Poza-Carrión, C; Rubio, LM. 2014. "Role of Azotobacter vinelandii FdxN in FeMo-co biosynthesis". FEBS Letters. DOI: 10.1016/j.febslet.2013.12.018".


- Plantation forestry under global warming: first thermotolerant trees

Merino, I; Contreras, A; Jing, Z-P; Gallardo, F; Cánovas, FM; Gómez, L. 2014. "Plantation forestry under global warming: hybrid poplars with improved thermotolerance provide new insights on the in vivo function of small heat shock protein chaperones". Plant Physiology. DOI: 10.1104/pp.113.225730".


- How do metals mediate symbiotic nitrogen fixation?

González-Guerrero, M; Matthiadis, A; Sáez, Á; Long, TA. 2014. "Fixating on metals: New insights into the role of metals in nodulation and symbiotic nitrogen fixation". Frontiers in Plant Science. DOI: 10.3389/fpls.2014.00045".


- Jasmonates mediates plant cell wall modifications which protect against Dickeya dadantii infection

Taurino, M; Abelenda, JA; Río-Alvarez, I; Navarro, C; Vicedo, B; Farmaki, T; Jiménez, P; García-Agustín, P; López-Solanilla, E; Prat, S; Rojo, E; Sánchez-Serrano, JJ; Sanmartín, M. 2014. "Jasmonate-dependent modifications of the pectin matrix during potato development function as a defense mechanism targeted by Dickeya dadantii virulence factors". Plant Journal. DOI: 10.1111/tpj.12393".


- Coordinated expression of nitrogen fixation genes

Poza-Carrión, C; Jiménez-Vicente, E; Navarro-Rodríguez, M; Echavarri-Erasun, C; Rubio, LM. 2014. "Kinetics of nif gene expression in a nitrogen-fixing bacterium". Journal of Bacteriology. DOI: 10.1128/jb.00942-13".


- "Bio-Hackers" update us on their global data integration progress

Katayama T; Wilkinson M; Aoki-Kinoshita K; Kawashima S; Yamamoto Y; Yamaguchi A; Okamoto S; Kawano S; Kim J-D; Wang Y; Wu H; Kano Y; Ono H; Bono H; Kocbek S; Aerts J; Akune Y; Antezana E; Arakawa K; Aranda B; Baran J; Bolleman J; Bonnal R; Buttigieg P; Campbell M; Chen Y; Chiba H; Cock P; Cohen K; Constantin A. 2014. "BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains". J. Biomed. Semantics 5:5.


- A powerful tool for the functional characterization of plant transcription factors

Coego, A; Brizuela, E; Castillejo, P; Ruíz, S; Koncz, C; del Pozo, JC; Piñeiro, M; Jarillo, JA; Paz-Ares, J; León, J; Transplanta Consortium, T. 2014. "The TRANSPLANTA collection of Arabidopsis lines: a resource for functional analysis of transcription factors based on their conditional overexpression". Plant Journal. DOI: 10.1111/tpj.12443".


- SIO – helping machines explore biological data

Dumontier, M; Baker, C; Baran, J; Callahan, A; Chepelev, L; Cruz-Toledo, J; Del Rio, N; Duck, G; Furlong, L; Keath, N; Klassen, D; McCusker, J; Queralt-Rosinach, N; Samwald, M; Villanueva-Rosales, N; Wilkinson, M; Hoehndorf, R. 2014. "The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery". Journal of Biomedical Semantics 5:14.


- Working with oxygen sensitive proteins

Echavarri-Erasun, C; Arragain, S; Rubio, LM. 2014. "Purification of O2-Sensitive metalloproteins", p. 5-18. In J. C. Fontecilla-Camps and Y. Nicolet (ed.), Metalloproteins, vol. 1122. Humana Press.


- Purification strategies for the SAM radical protein NifB

Echavarri-Erasun, C; Arragain, S; Scandurra, AA; Rubio, LM. 2014. "Expression and purification of NifB proteins from aerobic and anaerobic sources", p. 19-31. In J. C. Fontecilla-Camps and Y. Nicolet (ed.), Metalloproteins, vol. 1122. Humana Press.


- Plant chromatin warms up in Madrid

Jarillo, JA; Gaudin, V; Hennig, L; Köhler, C; Piñeiro, M. 2014. "Plant chromatin warms up in Madrid: Meeting summary of the 3rd European Workshop on Plant Chromatin 2013, Madrid, Spain". Epigenetics. DOI: 10.4161/epi.28094".


- Automatic detection and resolution of measurement-unit conflicts in aggregated data

Samadian S; McManus B; Wilkinson M. 2014. "Automatic detection and resolution of measurement-unit conflicts in aggregated data". BMC Med. Genomics 7:S12.


- RNA biology in the fungal eukaryotic kingdom

Sesma, A; von der Haar, T (ed.). 2014. "Fungal RNA Biology". Springer International Publishing Switzerland.


- Salt stress is a tremendous threat for agricultural production

Benito, B; Haro, R; Amtmann, A; Cuin, TA; Dreyer, I. 2014. "The twins K+ and Na+ in plants". Journal of Plant Physiology. DOI: 10.1016/j.jplph.2013.10.014".


- The AtCathB3 gene, encoding a cathepsinB-like protease, down-regulated by GBF1, affects seed germination and post-germination

Iglesias-Fernández, R; Wozny, D; Iriondo-de Hond, M; Oñate-Sánchez, L; Carbonero, P; Barrero-Sicilia, C. 2014. "The AtCathB3 gene, encoding a cathepsin B-like protease, is expressed during germination of Arabidopsis thaliana and transcriptionally repressed by the basic leucine zipper protein GBF1". Journal of Experimental Botany. DOI: 10.1093/jxb/eru055".


- Light regulates virulence in the plant pathogen Pseudomonas syringae pv tomato DC3000

Río-Álvarez, I; Rodríguez-Herva, JJ; Martínez, PM; González-Melendi, P; García-Casado, G; Rodríguez-Palenzuela, P; López-Solanilla, E. 2014. "Light regulates motility, attachment and virulence in the plant pathogen Pseudomonas syringae pv tomato DC3000". Environmental Microbiology. DOI: 10.1111/1462-2920.12240".


- Two homeodomain transcription factors activate expression of epidermis-specific genes, antagonizing DELLA protein function to coordinate embryo growth during seed germination

Iglesias-Fernández, R; Wozny, D; Iriondo-de Hond, M; Oñate-Sánchez, L; Carbonero, P; Barrero-Sicilia, C. 2014. "The AtCathB3 gene, encoding a cathepsin B-like protease, is expressed during germination of Arabidopsis thaliana and transcriptionally repressed by the basic leucine zipper protein GBF1". Journal of Experimental Botany. DOI: 10.1093/jxb/eru055".


- Potassium (K+) in plants

Dreyer, I. 2014. "Potassium (K+) in plants". Journal of Plant Physiology. DOI: 10.1016/j.jplph.2014.03.001".


- Challenges to develop nitrogen-fixing cereals by direct nif-gene transfer

Curatti, L and Rubio L.M. 2014. "Challenges to develop nitrogen-fixing cereals by direct nif-gene transfer". Plant Science. 225: 130-137.


- C1A cysteine protease-cystatin interaction in leaf senescence

Diaz-Mendoza, M; Velasco-Arroyo, B; González-Melendi, P; Martinez, M; Diaz, I. 2014. "C1A cysteine protease–cystatin interactions in leaf senescence". Journal of Experimental Botany. DOI: 10.1093/jxb/eru043".


- vertical transmission selects for reduced virulence in a plant virus and for increased resistance in the host

Pagán, I; Montes, M; Milgroom, MG; García-Arenal, F. 2014. "Vertical transmission selects for reduced virulence in a plant virus and for increased resistance in the host". PLoS Pathogens. DOI: 10.1371/journal.ppat.1004293".


- Control of glutaredoxin induction as a stress-response through a salicylic acid-mediated pathway

Herrera-Vásquez, A; Carvallo, L; Blanco, F; Tobar, M; Villarroel-Candia, E; Vicente-Carbajosa, J; Salinas, P; Holuigue, L. 2015. "Transcriptional control of glutaredoxin GRXC9 expression by a salicylic acid-dependent and NPR1-independent pathway in Arabidopsis". Plant Molecular Biology Reporter. DOI: 10.1007/s11105-014-0782-5".


- Executing SADI services in Galaxy

Egana Aranguren, M; Rodriguez Gonzalez, A; Wilkinson, MD. 2014. "Executing SADI services in Galaxy". Journal of Biomedical Semantics. DOI: 10.1186/2041-1480-5-42".


- Plant peptidases and their inhibitors: an evolutionary history

Santamaría, ME; Diaz-Mendoza, M; Diaz, I; Martinez, M. 2014. "Plant protein peptidase inhibitors: an evolutionary overview based on comparative genomics". BMC Genomics. DOI: 10.1186/1471-2164-15-812".


- Plant Specific Proteins Mediate Chromatin-Dependent Repression of the Arabidopsis Master Genes of Flowering

López-González, L; Mouriz, A; Narro-Diego, L; Bustos, R; Martínez-Zapater, JM; Jarillo, JA; Piñeiro, M. 2014. "Chromatin-dependent repression of the Arabidopsis floral integrator genes involves plant specific PHD-containing proteins". Plant Cell. DOI: 10.1105/tpc.114.130781".


- How science and medicine are affecting the Web

Luciano, JS; Cumming, GP; Kahana, E; Wilkinson, MD; Brooks, EH; Jarman, H; McGuinness, DL; Levine, MS. 2014. "Health Web Science". Foundations and Trends® in Web Science. DOI: 10.1561/1800000019".


- Which are the molecular bases associated with stress tolerance in autopolyploid plants?

del Pozo, JC; Ramirez-Parra, E. 2014. "Deciphering the molecular bases for drought tolerance in Arabidopsis autotetraploids". Plant Cell and Environment. DOI: 10.1111/pce.12344".


- Accessory proteins in clathrin-coated vesicle formation

Zouhar, J; Sauer, M. 2014. "Helping hands for budding prospects: ENTH/ANTH/VHS accessory proteins in endocytosis, vacuolar transport, and secretion". Plant Cell. DOI: 10.1105/tpc.114.131680".


- What data do you need today?

Rodríguez González, A; Callahan, A; Cruz-Toledo, J; Garcia, A; Egaña Aranguren, M; Dumontier, M; Wilkinson, M. 2014. "Automatically exposing OpenLifeData via SADI semantic Web Services". Journal of Biomedical Semantics. DOI: 10.1186/2041-1480-5-46


- Infectious diseases are important threats for the socioeconomic welfare of the humanity

Fraile, A; Hily, J-M; Pagán, I; Pacios, LF; García-Arenal, F. 2014. "Host resistance selects for traits unrelated to resistance-breaking that affect fitness in a plant virus". Molecular Biology and Evolution. DOI: 10.1093/molbev/msu045".



- Ubiquitination in the control of photoperiodic flowering

Piñeiro, M; Jarillo, JA. 2013. "Ubiquitination in the control of photoperiodic flowering". Plant Science. DOI: S0168-9452(12)00216-6 [pii] 10.1016/j.plantsci.2012.10.005".


- TOPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows

Egaña Aranguren, M; Fernández-Breis, JT; Antezana, E; Mungall, C; Rodríguez González, A; Wilkinson, MD. 2013. "OPPL-Galaxy, a Galaxy tool for enhancing ontology exploitation as part of bioinformatics workflows". Journal of Biomedical Semantics. DOI: 2041-1480-4-2 [pii] 10.1186/2041-1480-4-2".


- The 3rd DBCLS BioHackathon: improving life science data integration with semantic Web technologies

Katayama, T; Wilkinson, MD; Micklem, G; Kawashima, S; Yamaguchi, A; Nakao, M; Yamamoto, Y; Okamoto, S; Oouchida, K; Chun, HW; Aerts, J; Afzal, H; Antezana, E; Arakawa, K; Aranda, B; Belleau, F; Bolleman, J; Bonnal, RJ; Chapman, B; Cock, PJ; Eriksson, T; Gordon, PM; Goto, N; Hayashi, K; Horn, H; Ishiwata, R; Kaminuma, E; Kasprzyk, A; Kawaji, H; Kido, N; Kim, YJ; Kinjo, AR; Konishi, F; Kwon, KH; Labarga, A; Lamprecht, AL; Lin, Y; Lindenbaum, P; McCarthy, L; Morita, H; Murakami, K; Nagao, K; Nishida, K; Nishimura, K; Nishizawa, T; Ogishima, S; Ono, K; Oshita, K; Park, KJ; Prins, P; Saito, TL; Samwald, M; Satagopam, VP; Shigemoto, Y; Smith, R; Splendiani, A; Sugawara, H; Taylor, J; Vos, RA; Withers, D; Yamasaki, C; Zmasek, CM; Kawamoto, S; Okubo, K; Asai, K; Takagi, T. 2013. "The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies". Journal of Biomedical Semantics. DOI: 2041-1480-4-6 [pii] 10.1186/2041-1480-4-6".


- Poplar stems show opposite epigenetic patterns during winter dormancy and vegetative growth

Conde, D; González-Melendi, P; Allona, I. 2013. "Poplar stems show opposite epigenetic patterns during winter dormancy and vegetative growth". Trees. DOI: 10.1007/s00468-012-0800-x".


- Construction of a marker system for the evaluation of competitiveness for legume nodulation in rhizobium strains

Sánchez-Cañizares, C; Palacios, J. 2013. "Construction of a marker system for the evaluation of competitiveness for legume nodulation in Rhizobium strains". Journal of Microbiological Methods. DOI: S0167-7012(13)00003-1 [pii] 10.1016/j.mimet.2012.12.022".


- Genetic diversity of indigenous rhizobial symbionts of the Lupinus mariae-josephae endemism from alkaline-limed soils within its area of distribution in Eastern Spain - SystApplMicrobiol.

Durán, D; Rey, L; Sánchez-Cañizares, C; Navarro, A; Imperial, J; Ruiz-Argüeso, T. 2013. "Genetic diversity of indigenous rhizobial symbionts of the Lupinus mariae-josephae endemism from alkaline-limed soils within its area of distribution in Eastern Spain". Systematic and Applied Microbiology. DOI: S0723-2020(12)00159-2 [pii] 10.1016/j.syapm.2012.10.008".


- Landscape heterogeneity plays a key role in the interplay between plant viruses and their hosts

Rodelo-Urrego, M; Pagán, I; González-Jara, P; Betancourt, M; Moreno-Letelier, A; Ayllón, MA; Fraile, A; Piñero, D; García-Arenal, F. 2013. "Landscape heterogeneity shapes host-parasite interactions and results in apparent plant-virus codivergence". Molecular Ecology. DOI: 10.1111/mec.12232".


- The endophytic mycobiota of Arabidopsis thaliana

García, E; Alonso, Á; Platas, G; Sacristán, S. 2013. "The endophytic mycobiota of Arabidopsis thaliana". Fungal Diversity. DOI: 10.1007/s13225-012-0219-0".


- Roles of conserved basic amino acids in cyanobacterial nitrate reductases

Srivastava, AP; Hirasawa, M; Bhalla, M; Chung, JS; Allen, JP; Johnson, MK; Tripathy, JN; Rubio, LM; Vaccaro, B; Subramanian, S; Flores, E; Zabet-Moghaddam, M; Stitle, K; Knaff, DB. 2013. "Roles of four conserved basic amino acids in a ferredoxin-dependent cyanobacterial nitrate reductase". Biochemistry. DOI: 10.1021/bi400354n".


- Phylogenetic evidence of the transfer of nodZ ADN nolL genes from Bradyrhizobium to other rhizobia

Ormeño-Orrillo, E; Servín-Garcidueñas, LE; Imperial, J; Rey, L; Ruiz-Argüeso, T; Martínez-Romero, E. 2013. "Phylogenetic evidence of the transfer of nodZ and nolL genes from Bradyrhizobium to other rhizobia". Molecular Phylogenetics and Evolution. DOI: S1055-7903(13)00099-7 [pii] 10.1016/j.ympev.2013.03.003".


- Arabidopsis thaliana bZIP44: a transcription factor affecting seed germination and expression of the mannanase encoding gene AtMAN7

Iglesias-Fernández, R; Barrero-Sicilia, C; Carrillo-Barral, N; Oñate-Sánchez, L; Carbonero, P. 2013. "Arabidopsis thaliana bZIP44: a transcription factor affecting seed germination and expression of the mannanase encoding gene AtMAN7". Plant Journal. DOI: 10.1111/tpj.12162".


- A relevant role for the cell-cycle regulated ASF1 proteins in repairing UV-induced DNA damage

Lario, LD; Ramirez-Parra, E; Gutierrez, C; Spampinato, CP; Casati, P. 2013. "ANTI-SILENCING FUNCTION1 proteins are involved in ultraviolet-induced DNA damage repair and are cell cycle regulated by E2F transcription factors in Arabidopsis". Plant Physiology. DOI: pp.112.212837 [pii] 10.1104/pp.112.212837".


- Potassium channels are essential for the nutrition of plants with the essential element K+

Sharma, T; Dreyer, I; Riedelsberger, J. 2013. "The role of K+ channels in uptake and redistribution of potassium in the model plant Arabidopsis thaliana". Frontiers in Plant Science. DOI: 10.3389/fpls.2013.00224".


- Phylogenetic analyses reveal the origin and dispersion routes of the HIV-1B epidemic in The Caribbean and Central America

Pagán, I; Holguín, A. 2013. "Reconstructing the timing and dispersion routes of HIV-1 subtype B epidemics in the Caribbean and Central America: a phylogenetic story". PLoS One. DOI: 10.1371/journal.pone.0069218".


- Phylogenetically distant barley legumains have a role in both seed and vegetative tissues

Julián, I; Gandullo, J; Santos-Silva, LK; Diaz, I; Martinez, M. 2013. "Phylogenetically distant barley legumains have a role in both seed and vegetative tissues". Journal of Experimental Botany. DOI: ert132 [pii] 10.1093/jxb/ert132".


- Gene overlapping determines the adaptive capacity of RNA viruses

Simon-Loriere, E; Holmes, EC; Pagán, I. 2013. "The effect of gene overlapping on the rate of RNA virus evolution". Molecular Biology and Evolution. DOI: mst094 [pii] 10.1093/molbev/mst094".


- The Genus Bradyrhizobiun

Durán, D; Rey, L; Sánchez-Cañizares, C; Jorrín, B; Imperial, J; Ruiz-Argüeso, T. 2013. "Biodiversity of Slow-Growing Rhizobia: The Genus Bradyrhizobium", p. 21-46. In B. Rodelas and J. González (ed.), Beneficial Plant-microbial Interactions: Ecology and Applications. CRC Press.


- Iron distribution in Medicago truncatula nodules is related to its different functional zones

Rodríguez-Haas, B; Finney, L; Vogt, S; González-Melendi, P; Imperial, J; González-Guerrero, M. 2013. "Iron distribution through the developmental stages of Medicago truncatula nodules". Metallomics. DOI: 10.1039/c3mt00060e".


- Understanding plant defence responses against herbivore attacks: an essential first step towards the development of sustainable resistance against pests

Santamaria, ME; Martinez, M; Cambra, I; Grbic, V; Diaz, I. 2013. "Understanding plant defence responses against herbivore attacks: an essential first step towards the development of sustainable resistance against pests". Transgenic Research. DOI: 10.1007/s11248-013-9725-4".


- The Emergent Discipline of Health Web Science

Luciano, JS; Cumming, GP; Wilkinson, MD; Kahana, E. 2013. "The emergent discipline of health web science". Journal of Medical Internet Research. DOI: v15i8e166 [pii] 10.2196/jmir.2499".


- Identification of plant defense against arsenic

Castrillo, G; Sánchez-Bermejo, E; de Lorenzo, L; Crevillén, P; Fraile-Escanciano, A; TC, M; Mouriz, A; Catarecha, P; Sobrino-Plata, J; Olsson, S; Leo Del Puerto, Y; Mateos, I; Rojo, E; Hernández, LE; Jarillo, JA; Piñeiro, M; Paz-Ares, J; Leyva, A. 2013. "WRKY6 transcription factor restricts arsenate uptake and transposon activation in Arabidopsis". Plant Cell. DOI: tpc.113.114009 [pii] 10.1105/tpc.113.114009".


- Conformational changes represent the rate-limiting step in the transport cycle of maize sucrose transporter1

Derrer, C; Wittek, A; Bamberg, E; Carpaneto, A; Dreyer, I; Geiger, D. 2013. "Conformational changes represent the rate-limiting step in the transport cycle of maize SUCROSE TRANSPORTER1". Plant Cell. DOI: tpc.113.113621 [pii] 10.1105/tpc.113.113621".


- Binding of ferric ligands to a protein in competition against iron acquisition by pathogenic bacteria: an In silico study

Gómez-Casado, C; Roth-Walter, F; Jensen-Jarolim, E; Díaz-Perales, A; Pacios, LF. 2013. "Modeling iron-catecholates binding to NGAL protein". Journal of Molecular Graphics & Modelling. DOI: http://dx.doi.org/10.1016/j.jmgm.2013.08.013".


- Virulence evolution of a plant virus that infects two different hosts

Betancourt, M; Escriu, F; Fraile, A; García-Arenal, F. 2013. "Virulence evolution of a generalist plant virus in a heterogeneous host system". Evolutionary Applications. DOI: 10.1111/eva.12073".


- Pseudomonas putida, a soil bacterium with an uncommon type II protein secretion system

Putker, F; Tommassen-van Boxtel, R; Stork, M; Rodríguez-Herva, JJ; Koster, M; Tommassen, J. 2013. "The type II secretion system (Xcp) of Pseudomonas putida is active and involved in the secretion of phosphatases". Environmental Microbiology. DOI: 10.1111/1462-2920.12115".


- The study of two endomembrane K+ transporters in Physcomitrella patens reveals the complexity of ionic homeostasis

Mottaleb, SA; Rodriguez-Navarro, A; Haro, R. 2013. "Knockouts of Physcomitrella patens CHX1 and CHX2 transporters reveal high complexity of potassium homeostasis". Plant and Cell Physiology. DOI: pct096 [pii] 10.1093/pcp/pct096".


- PpHAK2, a K+ transporter of endoplasmic reticulum, is essential for the development of Physcomitrella patens in some stress conditions

Haro, R; Fraile-Escanciano, A; González-Melendi, P; Rodriguez-Navarro, A. 2013. "The potassium transporters HAK2 and HAK3 localize to endomembranes in Physcomitrella patens. HAK2 is required in some stress conditions". Plant and Cell Physiology. DOI: pct097 [pii] 10.1093/pcp/pct097".


- Molecular characterization of a metal efflux system in endosymbiotic bacteria

Rubio-Sanz, L; Prieto, RI; Imperial, J; Palacios, JM; Brito, B. 2013. "Functional and expression analysis of the metal-inducible dmeRF system from Rhizobium leguminosarum bv. viciae". Applied and Environmental Microbiology. DOI: AEM.01954-13 [pii] 10.1128/AEM.01954-13".


- Nia ATPase mediates iron detoxification in legume nodules

Zielazinski, EL; González-Guerrero, M; Subramanian, P; Stemmler, TL; Argüello, JM; Rosenzweig, AC. 2013. "Sinorhizobium meliloti Nia is a P1B-5-ATPase expressed in the nodule during plant symbiosis and is involved in Ni and Fe transport". Metallomics. DOI: 10.1039/c3mt00195d".


- Two different strains of the same virus induce different senescence degrees in the infected plant, mediated by salicylic acid

Manacorda, CA; Mansilla, C; Debat, H; Zavallo, D; Sánchez, F; Ponz, F; Asurmendi, S. 2013. "Salicylic acid determines differential senescence produced by two Turnip mosaic virus strains involving reactive oxygen species and early transcriptomic changes". Molecular Plant-Microbe Interactions. DOI: 10.1094/mpmi-07-13-0190-r".


- Plant viral nanoparticles modified to increase specific peptide immune response and as antibody sensors in biological fluids

Sánchez, F; Saéz, M; Lunello, P; Ponz, F. 2013. "Plant viral elongated nanoparticles modified for log-increases of foreign peptide immunogenicity and specific antibody detection". Journal of Biotechnology. DOI: http://dx.doi.org/10.1016/j.jbiotec.2013.09.002".


- In large parts of the world, aluminum in the soil is a problem for plant cultivation

Ligaba, A; Dreyer, I; Margaryan, A; Schneider, DJ; Kochian, L; Piñeros, M. 2013. "Functional, structural and phylogenetic analysis of domains underlying the Al sensitivity of the aluminum-activated malate/anion transporter, TaALMT1". Plant Journal. DOI: 10.1111/tpj.12332".



- Plants also have epigenetic regulation

Bratzel F, Yang C, Angelova A, López-Torrejón G, Koch M, del Pozo JC, Calonje M. (January 2012) Regulation of the new imprinted gene AtBMI1C during development requires the interplay of different epigenetic mechanisms. Molecular Plant. 5: 260-269.


- Arabidopsis heterotrimeric G protein regulates cell wall defense and resistance to necrotrophic fungi

Delgado-Cerezo M, Sánchez-Rodríguez C, Escudero V, Miedes E, Fernández PV, Jordá L, Hernández-Blanco C, Sánchez-Vallet A, Bednarek P, Schulze-Lefert P, Somerville S, Estevez JM, Persson S, Molina A. (2012). "Arabidopsis heterotrimeric G-protein regulates cell wall defense and resistance to necrotrophic fungi. "Molecular Plant 5: 98-114.


- SPARQL Assist language-neutral query composer

McCarthy, L; Vandervalk, B; Wilkinson, M. 2012. "SPARQL Assist language-neutral query composer" BMC bioinformatics, vol. 13 Suppl 1, no. Suppl 1, p. S2.


- How plant potassium channels sense the environmental pH

Gonzalez, W.; Riedelsberger, J.; Morales-Navarro, S.E.; Caballero, J.; Alzate-Morales, J.H.; Gonzalez-Nilo, F.D.; Dreyer, I. 2012. "The pH sensor of the plant K+-uptake channel KAT1 is built from a sensory cloud rather than from single key amino acids". Biochemical Journal. 442:57–63.


- Genetic relationship between wild and cultivated grapevine in Spain

de Andrés, M.T.; Benito, A.; Perez-Rivera, G.; Ocete, R.; Lopez, M.A.; Gaforio, L.; Muñoz, G.; Cabello, F.; Martínez-Zapater, J.M.; Arroyo-Garcia, R. 2012. "Genetic diversity of wild grapevine populations in Spain and their genetic relationship with cultivated grapevines". Molecular Ecology. 21(4):800-816.


- Rice natural products are involved in allelopathy

Xu, M., Galhano, R.; Wiemann, P.; Bueno, E.; Tiernan, M.; Wu, W.; Chung, I.M.; Gershenzon, J.; Tudzynski, B.; Sesma, A.; Peters, R.J. 2012. "Genetic evidence for natural product-mediated plant–plant allelopathy in rice (Oryza sativa)". New Phytologist. 193: 570–575.


- Vacuolar proton-pumps adjust to the conditions in which they are working

Rienmueller F, Dreyer I, Schoenknecht G, Schulz A, Schumacher K, Nagy R, Martinoia E, Marten I, Hedrich R (2012) "Luminal and cytosolic pH feedback on proton pump activity and ATP affinity of the V-type ATPase from Arabidopsis." J Biol Chem. 287(12): 8986-8993.


- Targeted-protein degradation is essential for the plant photoperiodic flowering response

Lazaro, A.; Valverde, F.; Pineiro, M.; Jarillo, J.A. 2012. The Arabidopsis E3 Ubiquitin Ligase HOS1 Negatively Regulates CONSTANS Abundance in the Photoperiodic Control of Flowering. Plant Cell 24:982-999.


- Genome-wide analysis of the response of dickeya dadantii 3937 to plant antimicrobial peptides

Rio-Alvarez I, Rodríguez-Herva JJ, Cuartas-Lanza R, Toth I, Pritchard L, Rodriquez-Palenzuela P, Lopez-Solanilla E. Abril-2012. "Genome-wide analysis of the response of Dickeya dadantii 3937 to plant antimicrobial peptides." Mol Plant Microbe Interact. 25(4):523-533.


- Histone H3 variants present a specific locatization over the plant genome

Stroud H, Otero S, Desvoyes B, Ramirez-Parra E, Jacobsen SE, Gutierrez C. Abril-2012. "Genome-wide analysis of histone H3.1 and H3.3 variants in Arabidopsis thaliana." PNAS. 109(14):5370-5375.


- Physionomics and metabolomics – two key approaches in herbical mode of action discovery

Grossmann K, Christiansen N, Looser R, Tresch S, Hutzler J, Pollmann S, Ehrhardt T. 2012. "Physionomics and metabolomics – two key approaches in herbical mode of action discovery". Pest Manag Sci. 68(4): 494-504.


- Signaling and Communication in Plants

Lazaro, A.; Valverde, F.; Pineiro, M.; Jarillo, J.A. 2012. The Arabidopsis E3 Ubiquitin Ligase HOS1 Negatively Regulates CONSTANS Abundance in the Photoperiodic Control of Flowering. Plant Cell 24:982-999.


- Lognocellulosic biomass yield enhancement

Moreno-Cortes, A; Hernandez-Verdeja, T; Sanchez-Jimenez, P; Gonzalez-Melendi, P; Aragoncillo, C; Allona, I. 2012. CsRAV1 induces sylleptic branching in hybrid poplar. New Phytologist 194:83-90.


- Metal transport across biomembranes: emerging models for a distinct chemistry

Arguello, J.M.; Raimunda, D.; Gonzalez-Guerrero, M. 2012. Metal Transport across Biomembranes: Emerging Models for a Distinct Chemistry. Journal of Biological Chemistry 287:13510-13517.


- A bacterial protease supresses plant inmune responses

Rodríguez-Herva, J. J., González-Melendi, P., Cuartas-Lanza, R., Antúnez-Lamas, M., Río-Alvarez, I., Li, Z., López-Torrejón, G., Díaz, I., del Pozo, J. C., Chakravarty, S., Collmer, A., Rodríguez-Palenzuela, P. y López-Solanilla, E. 2012. "A bacterial cysteine protease effector protein interferes with photosynthesis to suppress plant innate immune responses." Cellular Microbiology. 14(5):669-681.


- Molecular modelling in propeptide-peptidase interactions

Cambra, I.; Hernández, D.; Diaz, I.; Martinez, M. 2012. Structural basis for specificity of propeptide-enzyme interaction in barley C1A cysteine peptidases. PLoS One 7:e37234.


- C1A cysteine-proteases and their inhibitors in plants

Martinez, M.; Cambra, I.; Gonzalez-Melendi, P.; Santamaria, M.E.; Diaz, I. 2012. C1A cysteine-proteases and their inhibitors in plants. Physiologia Plantarum 145:85-94.


- Biotechnological approaches to sustainable pest control programs

Diaz, I.; Santamaria, M.E. 2012. "Biotechnological approaches to combat phytophagous arthropods. In: Arthropod-Plant interactions: novel insights and approaches for IPM. Series: Progress in Biological Control", Vol. 14. Smagghe, G. and Diaz, I. (Eds.) Springer, Dordrecht, Heidelberg, New York, London. p. 6-14


- Bioinformatics reveals coevolution between plant and arthropod genes

Martinez, M.2012. "Co-evolution of genes for specification in arthropod-plant interactions: a bioinformatic analysis in plant and arthropod genomes. In: Arthropod-Plant interactions: novel insights and approaches for IPM. Series: Progress in Biological Control", Vol. 14. Smagghe, G. and Diaz, I. (Eds.) Springer, Dordrecht, Heidelberg, New York, London. p. 1-14


- Dissecting arabidopsis Gb signal transduction on the protein surface

Jiang K, Frick-Cheng A, Trusov Y, Delgado-Cerezo M, Rosenthal D, Lorek J, Panstruga R, Booker F, Botella J, Molina A, Ort D, Jones AM. (2012). "Dissecting Arabidopsis Gbeta signal transduction on the protein surface". Plant Physiology. 159:975-983.


- Effect of biodiversity changes in disease risk: exploring disease emergence in a plant-virus system

Pagan, I.; Gonzalez-Jara, P.; Moreno-Letelier, A.; Rodelo-Urrego, M.; Fraile, A.; Pinero, D.; Garcia-Arenal, F. 2012. Effect of biodiversity changes in disease risk: exploring disease emergence in a plant-virus system. PLoS Pathog 8:e1002796.


- A new cathepsin F-like cysteine-peptidase highly regulated participates in barley grain protein mobilization

Martinez, M.; Dáder, B.; González-Melendi, P.; Gandullo, J.; Santamaria, M.E.; Diaz, I. 2012. A cathepsin F-like peptidase involved in barley grain protein mobilization, HvPap-1, is modulated by its own propeptide and by cystatins. Journal of Experimental Botany 63:4615-4629.


- Spider mite proliferations of specific groups of peptidases are putatively related to its broad host feeding range

Santamaria, M.E.; Hernández-Crespo, P.; Ortego, F.; Grbic, V.; Grbic, M.; Diaz, I.; Martinez, M. 2012. Cysteine peptidases and their inhibitors in Tetranychus urticae: a comparative genomic approach. BMC Genomics 13:307.


- Extending and encoding existing biological terminologies and datasets for use in the reasoned semantic web

Samadian, S; McManus, B; Wilkinson, M.D. 2012. "Extending and encoding existing biological terminologies and datasets for use in the reasoned semantic web" Journal of biomedical semantics, vol. 3, no. 1, p. 6, Jul.


- The gene pyramiding approach reduces the spider mite damage in plants and avoids it adaptability

Santamaria, M.E.;Cambra, I.;Martinez, M.; Pozancos, C.; González-Melendi, P.; Grbic, V.; Castañera, P.; Ortego, F.; Diaz, I. 2012. Gene pyramiding of peptidase inhibitors enhances plant resistance to the spider mite Tetranychus urticae. PLoS One 7:e43011


- Analysis of a Multilevel Diagnosis Decision Support System and Its Implications: A Case Study

Rodríguez-González, A; Torres-Niño, J; Mayer, M. A; Alor-Hernandez, G; Wilkinson, M.D. 2012. "Analysis of a multilevel diagnosis decision support system and its implications: a case study" Computational and Mathematical Methods in Medicine, vol. 2012, pp. 1-9.


- The role of secretion systems and small molecules in the induction of disease by soft-rot bacteria

Charkowski A, Blanco C, Condemine G, Expert D, Franza T, Hayes C, Hugouvieux-Cotte-Pattat N, López Solanilla E, Low D, Moleleki L, Pirhonen M, Pitman A, Perna N, Reverchon S, Rodríguez Palenzuela P, San Francisco M, Toth I, Tsuyumu S, van der Waals J, van der Wolf J, Van Gijsegem F, Yang CH, Yedidia I. 2012. The role of secretion systems and small molecules in soft-rot enterobacteriaceae pathogenicity. Annu Rev. Phytopathol. 2012 50:425-49.


- Arabidopsis ABCB21 is a facultative auxin importer/exporter regulated by cytoplasmic auxin concentration

Kamimoto, Y., Terasaka, K., Hamamoto, M., Takanashi, K., Fukuda, S., Shitan, N., Sugiyama, A., Suzuki, H., Shibata, D., Wang, B., Pollmann, S., Geisler, M., Yazaki, K. 2012. Arabidopsis ABCB21 is a Facultative Auxin Importer/Exporter Regulated by Cytoplasmic Auxin Concentration. Plant & Cell Physiology 53(12):2090-2100.


- OWL-DL Domain-Models as Abstract Workflows

Wood, I; Vandervalk, B; McCarthy, L; Wilkinson, M. 2012. "OWL-DL Domain-Models as Abstract Workflows" in Leveraging Applications of Formal Methods, Verification and Validation. Applications and Case Studies, T. Margaria and B. Steffen, Eds. Berlin/Heidelberg: Springer, pp. 56-66.


- Elucidation of the functional role of hupf protein as a oxygen-protecting chaperone in hydrogenase synthesis

Albareda, M.; Manyani, H.; Imperial, J.; Brito, B.; Ruiz-Argueso, T.; Bock, A.; Palacios, J.M. 2012. Dual role of HupF in the biosynthesis of [NiFe] hydrogenase in Rhizobium leguminosarum. BMC Microbiology 12:256.


- The Kuhnian approach of scientific progress requires research assessment to be based on highly cited papers

Rodriguez-Navarro, A. 2012. Counting highly cited papers for university research assessment: conceptual and technical issues. PLoS One 7:e47210.